Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00474Q9P2X8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00474Q9P2X8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 SRD5A1P1-201ENST00000442297 786 ntBASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00474Q9P2X8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00474Q9P2X8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 DUX4L19-201ENST00000557448 1267 ntBASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 AC131212.1-201ENST00000613771 668 ntBASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00474Q9P2X8 AC009102.2-201ENST00000606772 1639 ntBASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 AC144652.1-201ENST00000609974 1624 ntBASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 SLC25A24-204ENST00000569674 2357 ntBASIC14.33□□□□□ -0.11
LINC00474Q9P2X8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 LINC01529-204ENST00000636474 1715 ntBASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00474Q9P2X8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00474Q9P2X8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms