Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 AC006455.2-201ENST00000429931 906 ntBASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
BLOC1S4Q9NUP1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
BLOC1S4Q9NUP1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 AC099791.2-201ENST00000605725 427 ntBASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.82■■□□□ 1.56
BLOC1S4Q9NUP1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.81■■□□□ 1.56
BLOC1S4Q9NUP1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 AL499627.2-201ENST00000606283 725 ntBASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 AC241377.3-202ENST00000626088 1088 ntBASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 AC241585.3-202ENST00000628937 1088 ntBASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 AC245100.8-202ENST00000629247 1058 ntBASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BLOC1S4Q9NUP1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 AC131212.1-201ENST00000613771 668 ntBASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BLOC1S4Q9NUP1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 AC009086.3-201ENST00000623486 1008 ntBASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
BLOC1S4Q9NUP1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 SRD5A1P1-201ENST00000442297 786 ntBASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BLOC1S4Q9NUP1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
BLOC1S4Q9NUP1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BLOC1S4Q9NUP1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms