Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GRIN3AQ8TCU5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.62■■□□□ 1.21
GRIN3AQ8TCU5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
GRIN3AQ8TCU5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GRIN3AQ8TCU5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GRIN3AQ8TCU5 AC144652.1-201ENST00000609974 1624 ntBASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GRIN3AQ8TCU5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
GRIN3AQ8TCU5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 MIR939-201ENST00000401314 82 ntBASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
GRIN3AQ8TCU5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.58■■□□□ 1.2
GRIN3AQ8TCU5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 AC008764.7-201ENST00000593779 1081 ntBASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 AL136967.2-201ENST00000623968 743 ntBASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 AC012676.1-201ENST00000574705 1949 ntBASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 AC079630.1-202ENST00000618127 1840 ntBASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 LINC01529-204ENST00000636474 1715 ntBASIC22.57■■□□□ 1.2
GRIN3AQ8TCU5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 MIR935-201ENST00000401179 91 ntBASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
GRIN3AQ8TCU5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 FP325331.1-202ENST00000623531 1380 ntBASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
GRIN3AQ8TCU5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms