Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 SUDS3P1-201ENST00000505831 966 ntBASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 LINC01529-204ENST00000636474 1715 ntBASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 AC079630.1-202ENST00000618127 1840 ntBASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 AF213884.3-201ENST00000563833 479 ntBASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC9Q8TBE3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 AP001330.3-201ENST00000520123 633 ntBASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 DUX4L4-201ENST00000566884 1269 ntBASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC9Q8TBE3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.93■□□□□ 0.78
FNDC9Q8TBE3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 MIR939-201ENST00000401314 82 ntBASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 AL136967.2-201ENST00000623968 743 ntBASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC9Q8TBE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 AC133561.1-201ENST00000568600 2415 ntBASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FNDC9Q8TBE3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 AC008764.7-201ENST00000593779 1081 ntBASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 AC133637.1-201ENST00000624115 1537 ntBASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC9Q8TBE3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms