Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 DUSP8P3-201ENST00000399571 1760 ntBASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 CA15P2-201ENST00000611168 834 ntBASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.66■■□□□ 1.38
LIMS2Q7Z4I7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 AC099791.1-201ENST00000416440 715 ntBASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 AC010525.1-201ENST00000585559 441 ntBASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 AC008764.7-201ENST00000593779 1081 ntBASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LIMS2Q7Z4I7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
LIMS2Q7Z4I7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
LIMS2Q7Z4I7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LIMS2Q7Z4I7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
LIMS2Q7Z4I7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LIMS2Q7Z4I7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
LIMS2Q7Z4I7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LIMS2Q7Z4I7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LIMS2Q7Z4I7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIMS2Q7Z4I7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIMS2Q7Z4I7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIMS2Q7Z4I7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.62■■□□□ 1.37
LIMS2Q7Z4I7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LIMS2Q7Z4I7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LIMS2Q7Z4I7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 AC004687.1-201ENST00000579003 1625 ntBASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 ZNRF2P3-201ENST00000424200 374 ntBASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
LIMS2Q7Z4I7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
LIMS2Q7Z4I7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.58■■□□□ 1.37
LIMS2Q7Z4I7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.58■■□□□ 1.37
LIMS2Q7Z4I7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms