Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YER158CYER158C 1722 nt4.95□□□□□ -1.62
RPN11P43588 GCR2YNL199C 1605 nt4.95□□□□□ -1.62
RPN11P43588 FBP1YLR377C 1047 nt4.95□□□□□ -1.62
RPN11P43588 RPL19BYBL027W 570 nt4.95□□□□□ -1.62
RPN11P43588 STE7YDL159W 1548 nt4.95□□□□□ -1.62
RPN11P43588 CUS1YMR240C 1311 nt4.95□□□□□ -1.62
RPN11P43588 GRX6YDL010W 696 nt4.94□□□□□ -1.62
RPN11P43588 RIP1YEL024W 648 nt4.94□□□□□ -1.62
RPN11P43588 MRP13YGR084C 1020 nt4.94□□□□□ -1.62
RPN11P43588 JLP1YLL057C 1239 nt4.94□□□□□ -1.62
RPN11P43588 YLR326WYLR326W 723 nt4.94□□□□□ -1.62
RPN11P43588 YLR412C-AYLR412C-A 207 nt4.94□□□□□ -1.62
RPN11P43588 YSF3YNL138W-A 258 nt4.94□□□□□ -1.62
RPN11P43588 YOR020W-AYOR020W-A 273 nt4.94□□□□□ -1.62
RPN11P43588 IRC14YOR135C 342 nt4.94□□□□□ -1.62
RPN11P43588 GPI2YPL076W 843 nt4.94□□□□□ -1.62
RPN11P43588 CDC48YDL126C 2508 nt4.94□□□□□ -1.62
RPN11P43588 EUG1YDR518W 1554 nt4.94□□□□□ -1.62
RPN11P43588 CLB5YPR120C 1308 nt4.94□□□□□ -1.62
RPN11P43588 MRH4YGL064C 1686 nt4.93□□□□□ -1.62
RPN11P43588 RPA14YDR156W 414 nt4.93□□□□□ -1.62
RPN11P43588 NAT2YGR147C 867 nt4.93□□□□□ -1.62
RPN11P43588 SPS18YNL204C 903 nt4.93□□□□□ -1.62
RPN11P43588 ENV9YOR246C 993 nt4.93□□□□□ -1.62
RPN11P43588 GIP1YBR045C 1920 nt4.93□□□□□ -1.62
RPN11P43588 ABD1YBR236C 1311 nt4.93□□□□□ -1.62
RPN11P43588 VBA1YMR088C 1689 nt4.92□□□□□ -1.62
RPN11P43588 TCB3YML072C 4638 nt4.92□□□□□ -1.62
RPN11P43588 RPS16BYDL083C 432 nt4.92□□□□□ -1.62
RPN11P43588 MAF1YDR005C 1188 nt4.92□□□□□ -1.62
RPN11P43588 DOS2YDR068W 933 nt4.92□□□□□ -1.62
RPN11P43588 YFR052C-AYFR052C-A 306 nt4.92□□□□□ -1.62
RPN11P43588 YGR018CYGR018C 330 nt4.92□□□□□ -1.62
RPN11P43588 SAY1YGR263C 1275 nt4.92□□□□□ -1.62
RPN11P43588 YHR137C-AYHR137C-A 651 nt4.92□□□□□ -1.62
RPN11P43588 MHO1YJR008W 1017 nt4.92□□□□□ -1.62
RPN11P43588 RAD27YKL113C 1149 nt4.92□□□□□ -1.62
RPN11P43588 SDO1YLR022C 753 nt4.92□□□□□ -1.62
RPN11P43588 snR17bsnR17b 332 nt4.92□□□□□ -1.62
RPN11P43588 PPQ1YPL179W 1650 nt4.92□□□□□ -1.62
RPN11P43588 TRF5YNL299W 1929 nt4.91□□□□□ -1.62
RPN11P43588 PMA1YGL008C 2757 nt4.91□□□□□ -1.62
RPN11P43588 IFM1YOL023W 2031 nt4.91□□□□□ -1.62
RPN11P43588 UBP7YIL156W 3216 nt4.91□□□□□ -1.62
RPN11P43588 snR7-SsnR7-S 179 nt4.91□□□□□ -1.62
RPN11P43588 YER187WYER187W 426 nt4.91□□□□□ -1.62
RPN11P43588 AUA1YFL010W-A 285 nt4.91□□□□□ -1.62
RPN11P43588 SCL1YGL011C 759 nt4.91□□□□□ -1.62
RPN11P43588 YGL199CYGL199C 471 nt4.91□□□□□ -1.62
RPN11P43588 YJR056CYJR056C 711 nt4.91□□□□□ -1.62
RPN11P43588 GLO4YOR040W 858 nt4.91□□□□□ -1.62
RPN11P43588 UBS1YBR165W 834 nt4.91□□□□□ -1.62
RPN11P43588 ARX1YDR101C 1782 nt4.91□□□□□ -1.62
RPN11P43588 MPP10YJR002W 1782 nt4.91□□□□□ -1.62
RPN11P43588 EKI1YDR147W 1605 nt4.9□□□□□ -1.62
RPN11P43588 MUP3YHL036W 1641 nt4.9□□□□□ -1.62
RPN11P43588 IBA57YJR122W 1494 nt4.9□□□□□ -1.62
RPN11P43588 YJL193WYJL193W 1209 nt4.9□□□□□ -1.63
RPN11P43588 SIS2YKR072C 1689 nt4.89□□□□□ -1.63
RPN11P43588 EAR1YMR171C 1653 nt4.89□□□□□ -1.63
RPN11P43588 YJL206CYJL206C 2277 nt4.89□□□□□ -1.63
RPN11P43588 NSE3YDR288W 912 nt4.89□□□□□ -1.63
RPN11P43588 IRC6YFR043C 714 nt4.89□□□□□ -1.63
RPN11P43588 BUD13YGL174W 801 nt4.89□□□□□ -1.63
RPN11P43588 YIL028WYIL028W 399 nt4.89□□□□□ -1.63
RPN11P43588 YLL047WYLL047W 384 nt4.89□□□□□ -1.63
RPN11P43588 RPS0BYLR048W 759 nt4.89□□□□□ -1.63
RPN11P43588 OPY2YPR075C 1083 nt4.89□□□□□ -1.63
RPN11P43588 TGL1YKL140W 1647 nt4.89□□□□□ -1.63
RPN11P43588 IMA1YGR287C 1770 nt4.88□□□□□ -1.63
RPN11P43588 YHL012WYHL012W 1482 nt4.88□□□□□ -1.63
RPN11P43588 YIR007WYIR007W 2295 nt4.88□□□□□ -1.63
RPN11P43588 PER1YCR044C 1074 nt4.88□□□□□ -1.63
RPN11P43588 YHR022CYHR022C 771 nt4.88□□□□□ -1.63
RPN11P43588 MRPL6YHR147C 645 nt4.88□□□□□ -1.63
RPN11P43588 CDA2YLR308W 939 nt4.88□□□□□ -1.63
RPN11P43588 PLP2YOR281C 861 nt4.88□□□□□ -1.63
RPN11P43588 YPL077CYPL077C 723 nt4.88□□□□□ -1.63
RPN11P43588 FLC3YGL139W 2409 nt4.88□□□□□ -1.63
RPN11P43588 UBP9YER098W 2265 nt4.88□□□□□ -1.63
RPN11P43588 HOF1YMR032W 2010 nt4.87□□□□□ -1.63
RPN11P43588 KCC4YCL024W 3114 nt4.87□□□□□ -1.63
RPN11P43588 ROG3YFR022W 2202 nt4.87□□□□□ -1.63
RPN11P43588 UBC1YDR177W 648 nt4.87□□□□□ -1.63
RPN11P43588 SUI1YNL244C 327 nt4.87□□□□□ -1.63
RPN11P43588 LTO1YNL260C 597 nt4.87□□□□□ -1.63
RPN11P43588 NRG2YBR066C 663 nt4.87□□□□□ -1.63
RPN11P43588 YBR196C-BYBR196C-B 105 nt4.87□□□□□ -1.63
RPN11P43588 DAL81YIR023W 2913 nt4.87□□□□□ -1.63
RPN11P43588 ROD1YOR018W 2514 nt4.87□□□□□ -1.63
RPN11P43588 RCM1YNL022C 1473 nt4.87□□□□□ -1.63
RPN11P43588 LOS1YKL205W 3303 nt4.87□□□□□ -1.63
RPN11P43588 TIP20YGL145W 2106 nt4.87□□□□□ -1.63
RPN11P43588 GAS3YMR215W 1575 nt4.87□□□□□ -1.63
RPN11P43588 SAS10YDL153C 1833 nt4.86□□□□□ -1.63
RPN11P43588 PRR2YDL214C 2100 nt4.86□□□□□ -1.63
RPN11P43588 MRPL7YDR237W 879 nt4.86□□□□□ -1.63
RPN11P43588 YEL057CYEL057C 702 nt4.86□□□□□ -1.63
RPN11P43588 ADH4YGL256W 1149 nt4.86□□□□□ -1.63
RPN11P43588 YKR104WYKR104W 921 nt4.86□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms