Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
HMGCLP35914 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.19■■□□□ 1.14
HMGCLP35914 MIR3181-201ENST00000578512 73 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 AL138724.1-201ENST00000606771 1088 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 pRNA.6-201ENST00000610482 90 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 pRNA.5-201ENST00000612139 90 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 pRNA.11-201ENST00000618423 90 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 pRNA.13-201ENST00000619112 90 ntBASIC22.19■■□□□ 1.14
HMGCLP35914 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGCLP35914 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HMGCLP35914 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HMGCLP35914 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.18■■□□□ 1.14
HMGCLP35914 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLP35914 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.18■■□□□ 1.14
HMGCLP35914 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLP35914 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLP35914 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.18■■□□□ 1.14
HMGCLP35914 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGCLP35914 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCLP35914 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLP35914 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HMGCLP35914 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HMGCLP35914 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HMGCLP35914 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCLP35914 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCLP35914 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.17■■□□□ 1.14
HMGCLP35914 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLP35914 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
HMGCLP35914 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLP35914 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGCLP35914 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGCLP35914 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
HMGCLP35914 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.16■■□□□ 1.14
HMGCLP35914 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 SERBP1P1-201ENST00000396021 1160 ntBASIC22.16■■□□□ 1.14
HMGCLP35914 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.16■■□□□ 1.14
HMGCLP35914 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.16■■□□□ 1.14
HMGCLP35914 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.16■■□□□ 1.14
HMGCLP35914 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 C9orf163-202ENST00000624034 2573 ntBASIC22.16■■□□□ 1.14
HMGCLP35914 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HMGCLP35914 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.15■■□□□ 1.14
HMGCLP35914 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HMGCLP35914 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.15■■□□□ 1.14
HMGCLP35914 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
HMGCLP35914 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
HMGCLP35914 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
HMGCLP35914 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 AC133637.1-201ENST00000624115 1537 ntBASIC22.15■■□□□ 1.14
HMGCLP35914 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGCLP35914 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGCLP35914 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
HMGCLP35914 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HMGCLP35914 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.14■■□□□ 1.14
HMGCLP35914 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGCLP35914 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGCLP35914 AC011298.3-201ENST00000615796 283 ntBASIC22.14■■□□□ 1.13
HMGCLP35914 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
HMGCLP35914 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.14■■□□□ 1.13
HMGCLP35914 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGCLP35914 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCLP35914 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
HMGCLP35914 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCLP35914 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.13■■□□□ 1.13
HMGCLP35914 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCLP35914 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HMGCLP35914 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLP35914 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLP35914 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLP35914 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.12■■□□□ 1.13
HMGCLP35914 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLP35914 UNC93B3-201ENST00000308076 687 ntBASIC22.12■■□□□ 1.13
HMGCLP35914 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HMGCLP35914 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLP35914 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms