Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CAPNS1P04632 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.04■■□□□ 1.12
CAPNS1P04632 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.04■■□□□ 1.12
CAPNS1P04632 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.04■■□□□ 1.12
CAPNS1P04632 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.04■■□□□ 1.12
CAPNS1P04632 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.04■■□□□ 1.12
CAPNS1P04632 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CAPNS1P04632 ESRRAP2-201ENST00000418437 1549 ntBASIC22.04■■□□□ 1.12
CAPNS1P04632 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CAPNS1P04632 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L2-201ENST00000561772 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CAPNS1P04632 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L6-201ENST00000626483 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L1-201ENST00000627662 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L8-201ENST00000629013 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L3-201ENST00000630187 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L7-201ENST00000630678 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 DUX4L5-201ENST00000630834 1275 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 LINC00565-201ENST00000562710 2331 ntBASIC22.03■■□□□ 1.12
CAPNS1P04632 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CAPNS1P04632 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CAPNS1P04632 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CAPNS1P04632 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CAPNS1P04632 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CAPNS1P04632 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
CAPNS1P04632 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CAPNS1P04632 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.02■■□□□ 1.12
CAPNS1P04632 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.02■■□□□ 1.12
CAPNS1P04632 AL138724.1-201ENST00000606771 1088 ntBASIC22.02■■□□□ 1.12
CAPNS1P04632 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CAPNS1P04632 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CAPNS1P04632 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.01■■□□□ 1.11
CAPNS1P04632 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CAPNS1P04632 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.01■■□□□ 1.11
CAPNS1P04632 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.01■■□□□ 1.11
CAPNS1P04632 EP400NL-214ENST00000641289 2402 ntBASIC22.01■■□□□ 1.11
CAPNS1P04632 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.01■■□□□ 1.11
CAPNS1P04632 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CAPNS1P04632 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CAPNS1P04632 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22■■□□□ 1.11
CAPNS1P04632 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CAPNS1P04632 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
CAPNS1P04632 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22■■□□□ 1.11
CAPNS1P04632 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CAPNS1P04632 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22■■□□□ 1.11
CAPNS1P04632 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22■■□□□ 1.11
CAPNS1P04632 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22■■□□□ 1.11
CAPNS1P04632 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CAPNS1P04632 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CAPNS1P04632 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22■■□□□ 1.11
CAPNS1P04632 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22■■□□□ 1.11
CAPNS1P04632 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CAPNS1P04632 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CAPNS1P04632 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CAPNS1P04632 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CAPNS1P04632 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.99■■□□□ 1.11
CAPNS1P04632 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CAPNS1P04632 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CAPNS1P04632 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.99■■□□□ 1.11
CAPNS1P04632 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.99■■□□□ 1.11
CAPNS1P04632 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CAPNS1P04632 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CAPNS1P04632 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CAPNS1P04632 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
CAPNS1P04632 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.98■■□□□ 1.11
CAPNS1P04632 YBX1P1-201ENST00000445822 960 ntBASIC21.98■■□□□ 1.11
CAPNS1P04632 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CAPNS1P04632 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CAPNS1P04632 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.97■■□□□ 1.11
CAPNS1P04632 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CAPNS1P04632 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CAPNS1P04632 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms