Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC136428.2-201ENST00000563187 214 ntBASIC19.44■□□□□ 0.7
UPK1BO75841 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1BO75841 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK1BO75841 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1BO75841 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPK1BO75841 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.43■□□□□ 0.7
UPK1BO75841 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1BO75841 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1BO75841 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UPK1BO75841 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.43■□□□□ 0.7
UPK1BO75841 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
UPK1BO75841 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1BO75841 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1BO75841 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1BO75841 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.42■□□□□ 0.7
UPK1BO75841 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1BO75841 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1BO75841 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK1BO75841 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1BO75841 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
UPK1BO75841 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK1BO75841 AC148477.6-201ENST00000623746 465 ntBASIC19.41■□□□□ 0.7
UPK1BO75841 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.41■□□□□ 0.7
UPK1BO75841 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1BO75841 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.4■□□□□ 0.7
UPK1BO75841 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
UPK1BO75841 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1BO75841 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.4■□□□□ 0.7
UPK1BO75841 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1BO75841 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1BO75841 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK1BO75841 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPK1BO75841 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.7
UPK1BO75841 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
UPK1BO75841 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
UPK1BO75841 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UPK1BO75841 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UPK1BO75841 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.39■□□□□ 0.69
UPK1BO75841 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK1BO75841 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK1BO75841 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.38■□□□□ 0.69
UPK1BO75841 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK1BO75841 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK1BO75841 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.38■□□□□ 0.69
UPK1BO75841 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UPK1BO75841 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK1BO75841 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1BO75841 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1BO75841 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
UPK1BO75841 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.37■□□□□ 0.69
UPK1BO75841 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1BO75841 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UPK1BO75841 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK1BO75841 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK1BO75841 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1BO75841 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1BO75841 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1BO75841 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1BO75841 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
UPK1BO75841 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UPK1BO75841 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPK1BO75841 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
UPK1BO75841 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.35■□□□□ 0.69
UPK1BO75841 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.35■□□□□ 0.69
UPK1BO75841 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms