Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGC3Q9UN70 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 AC012676.1-201ENST00000574705 1949 ntBASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 AC241377.3-202ENST00000626088 1088 ntBASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 AC241585.3-202ENST00000628937 1088 ntBASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 AC245100.8-202ENST00000629247 1058 ntBASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PCDHGC3Q9UN70 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGC3Q9UN70 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PCDHGC3Q9UN70 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 AC009086.3-201ENST00000623486 1008 ntBASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGC3Q9UN70 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.58■■□□□ 1.36
PCDHGC3Q9UN70 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGC3Q9UN70 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGC3Q9UN70 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGC3Q9UN70 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 AL499627.2-201ENST00000606283 725 ntBASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGC3Q9UN70 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 AC131281.2-201ENST00000520478 145 ntBASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 MIR4466-201ENST00000606121 54 ntBASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGC3Q9UN70 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms