Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SUDS3P1-201ENST00000505831 966 ntBASIC23.54■■□□□ 1.36
SMOQ99835 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.54■■□□□ 1.36
SMOQ99835 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.54■■□□□ 1.36
SMOQ99835 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.54■■□□□ 1.36
SMOQ99835 AL353803.4-201ENST00000565882 1934 ntBASIC23.54■■□□□ 1.36
SMOQ99835 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMOQ99835 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.54■■□□□ 1.36
SMOQ99835 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.53■■□□□ 1.36
SMOQ99835 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.53■■□□□ 1.36
SMOQ99835 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMOQ99835 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMOQ99835 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMOQ99835 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.52■■□□□ 1.36
SMOQ99835 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMOQ99835 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.52■■□□□ 1.36
SMOQ99835 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.52■■□□□ 1.36
SMOQ99835 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.52■■□□□ 1.36
SMOQ99835 AL355001.2-201ENST00000620617 1191 ntBASIC23.52■■□□□ 1.36
SMOQ99835 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.52■■□□□ 1.36
SMOQ99835 AC019069.1-201ENST00000610008 1333 ntBASIC23.52■■□□□ 1.36
SMOQ99835 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.51■■□□□ 1.35
SMOQ99835 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.51■■□□□ 1.35
SMOQ99835 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SMOQ99835 AC133637.1-201ENST00000624115 1537 ntBASIC23.51■■□□□ 1.35
SMOQ99835 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.51■■□□□ 1.35
SMOQ99835 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SMOQ99835 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SMOQ99835 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMOQ99835 AC092068.2-201ENST00000590491 1708 ntBASIC23.5■■□□□ 1.35
SMOQ99835 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SMOQ99835 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMOQ99835 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.5■■□□□ 1.35
SMOQ99835 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.49■■□□□ 1.35
SMOQ99835 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SMOQ99835 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.49■■□□□ 1.35
SMOQ99835 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 AP001330.3-201ENST00000520123 633 ntBASIC23.49■■□□□ 1.35
SMOQ99835 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.49■■□□□ 1.35
SMOQ99835 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.49■■□□□ 1.35
SMOQ99835 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
SMOQ99835 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SMOQ99835 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMOQ99835 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.49■■□□□ 1.35
SMOQ99835 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMOQ99835 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.48■■□□□ 1.35
SMOQ99835 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMOQ99835 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.48■■□□□ 1.35
SMOQ99835 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMOQ99835 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.48■■□□□ 1.35
SMOQ99835 AF213884.3-201ENST00000563833 479 ntBASIC23.48■■□□□ 1.35
SMOQ99835 AL136967.2-201ENST00000623968 743 ntBASIC23.48■■□□□ 1.35
SMOQ99835 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMOQ99835 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SMOQ99835 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SMOQ99835 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.47■■□□□ 1.35
SMOQ99835 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.47■■□□□ 1.35
SMOQ99835 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 MIR939-201ENST00000401314 82 ntBASIC23.47■■□□□ 1.35
SMOQ99835 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.47■■□□□ 1.35
SMOQ99835 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SMOQ99835 AC142381.2-201ENST00000566120 298 ntBASIC23.47■■□□□ 1.35
SMOQ99835 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.47■■□□□ 1.35
SMOQ99835 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
SMOQ99835 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SMOQ99835 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.47■■□□□ 1.35
SMOQ99835 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SMOQ99835 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SMOQ99835 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.46■■□□□ 1.35
SMOQ99835 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.46■■□□□ 1.35
SMOQ99835 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.46■■□□□ 1.35
SMOQ99835 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.46■■□□□ 1.35
SMOQ99835 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SMOQ99835 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SMOQ99835 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SMOQ99835 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms