Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH15Q96QU1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
PCDH15Q96QU1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDH15Q96QU1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH15Q96QU1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH15Q96QU1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH15Q96QU1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
PCDH15Q96QU1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDH15Q96QU1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PCDH15Q96QU1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22■■□□□ 1.11
PCDH15Q96QU1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22■■□□□ 1.11
PCDH15Q96QU1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22■■□□□ 1.11
PCDH15Q96QU1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH15Q96QU1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 HLA-L-211ENST00000482052 1765 ntBASIC21.99■■□□□ 1.11
PCDH15Q96QU1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.99■■□□□ 1.11
PCDH15Q96QU1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH15Q96QU1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH15Q96QU1 AC006015.1-201ENST00000429970 570 ntBASIC21.98■■□□□ 1.11
PCDH15Q96QU1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.98■■□□□ 1.11
PCDH15Q96QU1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDH15Q96QU1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 AC135731.1-201ENST00000569415 2548 ntBASIC21.96■■□□□ 1.11
PCDH15Q96QU1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDH15Q96QU1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDH15Q96QU1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 AC016769.1-201ENST00000409132 1010 ntBASIC21.95■■□□□ 1.1
PCDH15Q96QU1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms