Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 BID-214ENST00000617586 542 ntTSL 5 BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 AP004607.4-201ENST00000530158 1459 ntBASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
TRIM43Q96BQ3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM43Q96BQ3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 NCF1B-203ENST00000435988 1254 ntBASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 AC004854.2-201ENST00000608450 1441 ntBASIC24.6■■□□□ 1.53
TRIM43Q96BQ3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 TPRG1LP1-201ENST00000598702 760 ntBASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 AC066615.1-201ENST00000640911 628 ntBASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM43Q96BQ3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 HLA-L-211ENST00000482052 1765 ntBASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM43Q96BQ3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM43Q96BQ3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM43Q96BQ3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TRIM43Q96BQ3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.54■■□□□ 1.52
TRIM43Q96BQ3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 CD99P1-205ENST00000527459 561 ntBASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM43Q96BQ3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM43Q96BQ3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM43Q96BQ3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM43Q96BQ3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.52■■□□□ 1.52
TRIM43Q96BQ3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM43Q96BQ3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms