Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC9Q8TBE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FNDC9Q8TBE3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FNDC9Q8TBE3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC9Q8TBE3 MIR3181-201ENST00000578512 73 ntBASIC20.02■□□□□ 0.8
FNDC9Q8TBE3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC9Q8TBE3 AL138724.1-201ENST00000606771 1088 ntBASIC20.02■□□□□ 0.8
FNDC9Q8TBE3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
FNDC9Q8TBE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC9Q8TBE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC9Q8TBE3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC9Q8TBE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FNDC9Q8TBE3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 MIR4767-201ENST00000582827 78 ntBASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 AC011298.3-201ENST00000615796 283 ntBASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC9Q8TBE3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
FNDC9Q8TBE3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 EDA-201ENST00000338901 1233 ntBASIC20■□□□□ 0.79
FNDC9Q8TBE3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20■□□□□ 0.79
FNDC9Q8TBE3 pRNA.6-201ENST00000610482 90 ntBASIC20■□□□□ 0.79
FNDC9Q8TBE3 pRNA.5-201ENST00000612139 90 ntBASIC20■□□□□ 0.79
FNDC9Q8TBE3 pRNA.11-201ENST00000618423 90 ntBASIC20■□□□□ 0.79
FNDC9Q8TBE3 pRNA.13-201ENST00000619112 90 ntBASIC20■□□□□ 0.79
FNDC9Q8TBE3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
FNDC9Q8TBE3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
FNDC9Q8TBE3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20■□□□□ 0.79
FNDC9Q8TBE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
FNDC9Q8TBE3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 AC144652.1-201ENST00000609974 1624 ntBASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 AC142381.2-201ENST00000566120 298 ntBASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 AL031432.3-201ENST00000607698 485 ntBASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.99■□□□□ 0.79
FNDC9Q8TBE3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 AL355001.2-201ENST00000620617 1191 ntBASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
FNDC9Q8TBE3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 FP325331.1-202ENST00000623531 1380 ntBASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 AC136469.2-201ENST00000623944 1028 ntBASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC9Q8TBE3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
FNDC9Q8TBE3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms