Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.57■■■□□ 2.64
XRN1Q8IZH2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
XRN1Q8IZH2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
XRN1Q8IZH2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.56■■■□□ 2.64
XRN1Q8IZH2 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.56■■■□□ 2.64
XRN1Q8IZH2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 AC016769.1-201ENST00000409132 1010 ntBASIC31.55■■■□□ 2.64
XRN1Q8IZH2 AC137761.2-201ENST00000561729 223 ntBASIC31.55■■■□□ 2.64
XRN1Q8IZH2 AC145350.3-201ENST00000569033 163 ntBASIC31.55■■■□□ 2.64
XRN1Q8IZH2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.55■■■□□ 2.64
XRN1Q8IZH2 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.55■■■□□ 2.64
XRN1Q8IZH2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.55■■■□□ 2.64
XRN1Q8IZH2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 AL121749.1-202ENST00000609313 2153 ntBASIC31.54■■■□□ 2.64
XRN1Q8IZH2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
XRN1Q8IZH2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 AC105233.4-201ENST00000642045 216 ntBASIC31.53■■■□□ 2.64
XRN1Q8IZH2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
XRN1Q8IZH2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.52■■■□□ 2.64
XRN1Q8IZH2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.51■■■□□ 2.63
XRN1Q8IZH2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
XRN1Q8IZH2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.5■■■□□ 2.63
XRN1Q8IZH2 DUX4L4-201ENST00000566884 1269 ntBASIC31.49■■■□□ 2.63
XRN1Q8IZH2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
XRN1Q8IZH2 CROCCP5-201ENST00000436658 830 ntBASIC31.49■■■□□ 2.63
XRN1Q8IZH2 AC026185.1-201ENST00000445748 174 ntBASIC31.49■■■□□ 2.63
XRN1Q8IZH2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
XRN1Q8IZH2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.48■■■□□ 2.63
XRN1Q8IZH2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
XRN1Q8IZH2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
XRN1Q8IZH2 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.48■■■□□ 2.63
XRN1Q8IZH2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 MIR663A-201ENST00000385250 93 ntBASIC31.47■■■□□ 2.63
XRN1Q8IZH2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 AC004854.2-201ENST00000608450 1441 ntBASIC31.47■■■□□ 2.63
XRN1Q8IZH2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.47■■■□□ 2.63
XRN1Q8IZH2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 AP004607.4-201ENST00000530158 1459 ntBASIC31.46■■■□□ 2.63
XRN1Q8IZH2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
XRN1Q8IZH2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
XRN1Q8IZH2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
XRN1Q8IZH2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.45■■■□□ 2.62
XRN1Q8IZH2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
XRN1Q8IZH2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms