Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.26■■■□□ 2.11
CCT4P50991 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCT4P50991 AL353803.4-201ENST00000565882 1934 ntBASIC28.26■■■□□ 2.11
CCT4P50991 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.25■■■□□ 2.11
CCT4P50991 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.25■■■□□ 2.11
CCT4P50991 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCT4P50991 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCT4P50991 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.24■■■□□ 2.11
CCT4P50991 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CCT4P50991 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.24■■■□□ 2.11
CCT4P50991 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CCT4P50991 AC006455.2-201ENST00000429931 906 ntBASIC28.24■■■□□ 2.11
CCT4P50991 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.24■■■□□ 2.11
CCT4P50991 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CCT4P50991 AL355001.2-201ENST00000620617 1191 ntBASIC28.24■■■□□ 2.11
CCT4P50991 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.24■■■□□ 2.11
CCT4P50991 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCT4P50991 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.23■■■□□ 2.11
CCT4P50991 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.23■■■□□ 2.11
CCT4P50991 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.23■■■□□ 2.11
CCT4P50991 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.23■■■□□ 2.11
CCT4P50991 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCT4P50991 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
CCT4P50991 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT4P50991 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT4P50991 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCT4P50991 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.22■■■□□ 2.11
CCT4P50991 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.22■■■□□ 2.11
CCT4P50991 DUX4L19-201ENST00000557448 1267 ntBASIC28.22■■■□□ 2.11
CCT4P50991 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT4P50991 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.22■■■□□ 2.11
CCT4P50991 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCT4P50991 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.22■■■□□ 2.11
CCT4P50991 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CCT4P50991 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.21■■■□□ 2.11
CCT4P50991 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.21■■■□□ 2.11
CCT4P50991 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.21■■■□□ 2.11
CCT4P50991 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.21■■■□□ 2.11
CCT4P50991 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.21■■■□□ 2.11
CCT4P50991 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 DUSP8P3-201ENST00000399571 1760 ntBASIC28.21■■■□□ 2.11
CCT4P50991 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCT4P50991 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
CCT4P50991 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CCT4P50991 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.2■■■□□ 2.11
CCT4P50991 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCT4P50991 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
CCT4P50991 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.2■■■□□ 2.11
CCT4P50991 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.2■■■□□ 2.1
CCT4P50991 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
CCT4P50991 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCT4P50991 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CCT4P50991 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.2■■■□□ 2.1
CCT4P50991 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
CCT4P50991 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCT4P50991 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCT4P50991 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CCT4P50991 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CCT4P50991 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CCT4P50991 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CCT4P50991 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCT4P50991 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.19■■■□□ 2.1
CCT4P50991 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.19■■■□□ 2.1
CCT4P50991 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CCT4P50991 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.19■■■□□ 2.1
CCT4P50991 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCT4P50991 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.18■■■□□ 2.1
CCT4P50991 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CCT4P50991 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CCT4P50991 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 AL499627.2-201ENST00000606283 725 ntBASIC28.18■■■□□ 2.1
CCT4P50991 SYT6-210ENST00000641643 1587 ntBASIC28.18■■■□□ 2.1
CCT4P50991 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.18■■■□□ 2.1
CCT4P50991 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.18■■■□□ 2.1
CCT4P50991 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCT4P50991 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.17■■■□□ 2.1
CCT4P50991 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms