Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YPK9YOR291W 4419 nt3.83□□□□□ -1.8
SSH1P38353 TYW1YPL207W 2433 nt3.82□□□□□ -1.8
SSH1P38353 TOG1YER184C 2385 nt3.82□□□□□ -1.8
SSH1P38353 HOYDL227C 1761 nt3.82□□□□□ -1.8
SSH1P38353 TAF8YML114C 1533 nt3.82□□□□□ -1.8
SSH1P38353 MLF3YNL074C 1359 nt3.82□□□□□ -1.8
SSH1P38353 YDL183CYDL183C 963 nt3.82□□□□□ -1.8
SSH1P38353 BNA6YFR047C 888 nt3.82□□□□□ -1.8
SSH1P38353 COX2Q0250 756 nt3.82□□□□□ -1.8
SSH1P38353 CIA2YHR122W 696 nt3.82□□□□□ -1.8
SSH1P38353 YOR034C-AYOR034C-A 243 nt3.82□□□□□ -1.8
SSH1P38353 MCD4YKL165C 2760 nt3.81□□□□□ -1.8
SSH1P38353 PEX30YLR324W 1572 nt3.81□□□□□ -1.8
SSH1P38353 EGT2YNL327W 3126 nt3.81□□□□□ -1.8
SSH1P38353 SPO74YGL170C 1242 nt3.81□□□□□ -1.8
SSH1P38353 RTA1YGR213C 954 nt3.81□□□□□ -1.8
SSH1P38353 OAR1YKL055C 837 nt3.81□□□□□ -1.8
SSH1P38353 YAR030CYAR030C 342 nt3.81□□□□□ -1.8
SSH1P38353 PHA2YNL316C 1005 nt3.81□□□□□ -1.8
SSH1P38353 YPL025CYPL025C 558 nt3.81□□□□□ -1.8
SSH1P38353 MGR2YPL098C 342 nt3.81□□□□□ -1.8
SSH1P38353 TRK1YJL129C 3708 nt3.81□□□□□ -1.8
SSH1P38353 CDC6YJL194W 1542 nt3.8□□□□□ -1.8
SSH1P38353 OMS1YDR316W 1416 nt3.8□□□□□ -1.8
SSH1P38353 RTC1YOL138C 4026 nt3.8□□□□□ -1.8
SSH1P38353 HSP31YDR533C 714 nt3.8□□□□□ -1.8
SSH1P38353 YFR034W-AYFR034W-A 288 nt3.8□□□□□ -1.8
SSH1P38353 YLF2YHL014C 1218 nt3.8□□□□□ -1.8
SSH1P38353 tR(ACG)JtR(ACG)J 73 nt3.8□□□□□ -1.8
SSH1P38353 LNP1YHR192W 837 nt3.8□□□□□ -1.8
SSH1P38353 LOH1YJL038C 660 nt3.8□□□□□ -1.8
SSH1P38353 YJL218WYJL218W 591 nt3.8□□□□□ -1.8
SSH1P38353 ADD66YKL206C 804 nt3.8□□□□□ -1.8
SSH1P38353 PEP5YMR231W 3090 nt3.8□□□□□ -1.8
SSH1P38353 YDR445CYDR445C 408 nt3.79□□□□□ -1.8
SSH1P38353 PCL1YNL289W 840 nt3.79□□□□□ -1.8
SSH1P38353 UPC2YDR213W 2742 nt3.79□□□□□ -1.8
SSH1P38353 EKI1YDR147W 1605 nt3.79□□□□□ -1.8
SSH1P38353 DIT1YDR403W 1611 nt3.79□□□□□ -1.8
SSH1P38353 BRE4YDL231C 3378 nt3.79□□□□□ -1.8
SSH1P38353 CYM1YDR430C 2970 nt3.79□□□□□ -1.8
SSH1P38353 YPR003CYPR003C 2265 nt3.79□□□□□ -1.8
SSH1P38353 YIL001WYIL001W 1542 nt3.79□□□□□ -1.8
SSH1P38353 SEG1YMR086W 2883 nt3.79□□□□□ -1.8
SSH1P38353 JHD2YJR119C 2187 nt3.79□□□□□ -1.8
SSH1P38353 FAS2YPL231W 5664 nt3.78□□□□□ -1.8
SSH1P38353 ECM22YLR228C 2445 nt3.78□□□□□ -1.8
SSH1P38353 LPP1YDR503C 825 nt3.78□□□□□ -1.8
SSH1P38353 SPI1YER150W 447 nt3.78□□□□□ -1.8
SSH1P38353 MRPL25YGR076C 474 nt3.78□□□□□ -1.8
SSH1P38353 YIL171WYIL171W 330 nt3.78□□□□□ -1.8
SSH1P38353 YLR036CYLR036C 612 nt3.78□□□□□ -1.8
SSH1P38353 MRPL24YMR193W 777 nt3.78□□□□□ -1.8
SSH1P38353 YNL217WYNL217W 981 nt3.78□□□□□ -1.8
SSH1P38353 YNL296WYNL296W 315 nt3.78□□□□□ -1.8
SSH1P38353 YBR016WYBR016W 387 nt3.78□□□□□ -1.8
SSH1P38353 ECM23YPL021W 564 nt3.78□□□□□ -1.8
SSH1P38353 SNF2YOR290C 5112 nt3.78□□□□□ -1.8
SSH1P38353 SIR2YDL042C 1689 nt3.78□□□□□ -1.81
SSH1P38353 YOL075CYOL075C 3885 nt3.77□□□□□ -1.81
SSH1P38353 RNA14YMR061W 2034 nt3.77□□□□□ -1.81
SSH1P38353 SPR6YER115C 576 nt3.77□□□□□ -1.81
SSH1P38353 TOM20YGR082W 552 nt3.77□□□□□ -1.81
SSH1P38353 ATG33YLR356W 594 nt3.77□□□□□ -1.81
SSH1P38353 SPS19YNL202W 879 nt3.77□□□□□ -1.81
SSH1P38353 YPL073CYPL073C 486 nt3.77□□□□□ -1.81
SSH1P38353 YDC1YPL087W 954 nt3.77□□□□□ -1.81
SSH1P38353 SRO7YPR032W 3102 nt3.77□□□□□ -1.81
SSH1P38353 CDC14YFR028C 1656 nt3.77□□□□□ -1.81
SSH1P38353 MIS1YBR084W 2928 nt3.77□□□□□ -1.81
SSH1P38353 YRM1YOR172W 2361 nt3.76□□□□□ -1.81
SSH1P38353 YIL092WYIL092W 1902 nt3.76□□□□□ -1.81
SSH1P38353 RIM4YHL024W 2142 nt3.76□□□□□ -1.81
SSH1P38353 OCA4YCR095C 1089 nt3.76□□□□□ -1.81
SSH1P38353 RRP45YDR280W 918 nt3.76□□□□□ -1.81
SSH1P38353 SKI8YGL213C 1194 nt3.76□□□□□ -1.81
SSH1P38353 BIO2YGR286C 1128 nt3.76□□□□□ -1.81
SSH1P38353 RPS0BYLR048W 759 nt3.76□□□□□ -1.81
SSH1P38353 YMR105W-AYMR105W-A 195 nt3.76□□□□□ -1.81
SSH1P38353 ICY2YPL250C 411 nt3.76□□□□□ -1.81
SSH1P38353 PBN1YCL052C 1251 nt3.76□□□□□ -1.81
SSH1P38353 SVF1YDR346C 1446 nt3.76□□□□□ -1.81
SSH1P38353 PRP9YDL030W 1593 nt3.76□□□□□ -1.81
SSH1P38353 TIP20YGL145W 2106 nt3.76□□□□□ -1.81
SSH1P38353 GAS5YOL030W 1455 nt3.75□□□□□ -1.81
SSH1P38353 snR7-LsnR7-L 214 nt3.75□□□□□ -1.81
SSH1P38353 THI13YDL244W 1023 nt3.75□□□□□ -1.81
SSH1P38353 THI11YJR156C 1023 nt3.75□□□□□ -1.81
SSH1P38353 DBR1YKL149C 1218 nt3.75□□□□□ -1.81
SSH1P38353 ECM15YBL001C 315 nt3.75□□□□□ -1.81
SSH1P38353 YBL029WYBL029W 1131 nt3.75□□□□□ -1.81
SSH1P38353 FAR10YLR238W 1437 nt3.75□□□□□ -1.81
SSH1P38353 GCD1YOR260W 1737 nt3.75□□□□□ -1.81
SSH1P38353 RIA1YNL163C 3333 nt3.74□□□□□ -1.81
SSH1P38353 SPO73YER046W 432 nt3.74□□□□□ -1.81
SSH1P38353 PTR3YFR029W 2037 nt3.74□□□□□ -1.81
SSH1P38353 tQ(UUG)CtQ(UUG)C 72 nt3.74□□□□□ -1.81
SSH1P38353 tQ(UUG)D1tQ(UUG)D1 72 nt3.74□□□□□ -1.81
SSH1P38353 tQ(UUG)D2tQ(UUG)D2 72 nt3.74□□□□□ -1.81
SSH1P38353 tQ(UUG)D3tQ(UUG)D3 72 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms