Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.44■□□□□ 0.7
CCL2P13500 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.43■□□□□ 0.7
CCL2P13500 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL2P13500 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCL2P13500 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL2P13500 DUSP8P5-201ENST00000422884 1815 ntBASIC19.43■□□□□ 0.7
CCL2P13500 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCL2P13500 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL2P13500 AC099791.2-201ENST00000605725 427 ntBASIC19.42■□□□□ 0.7
CCL2P13500 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCL2P13500 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL2P13500 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CCL2P13500 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL2P13500 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL2P13500 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL2P13500 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL2P13500 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL2P13500 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.41■□□□□ 0.7
CCL2P13500 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.41■□□□□ 0.7
CCL2P13500 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.41■□□□□ 0.7
CCL2P13500 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
CCL2P13500 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL2P13500 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL2P13500 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL2P13500 LINC01529-204ENST00000636474 1715 ntBASIC19.39■□□□□ 0.7
CCL2P13500 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCL2P13500 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCL2P13500 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL2P13500 AC006455.2-201ENST00000429931 906 ntBASIC19.39■□□□□ 0.69
CCL2P13500 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
CCL2P13500 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCL2P13500 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL2P13500 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL2P13500 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL2P13500 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCL2P13500 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL2P13500 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL2P13500 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCL2P13500 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL2P13500 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL2P13500 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.38■□□□□ 0.69
CCL2P13500 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL2P13500 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL2P13500 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL2P13500 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCL2P13500 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.37■□□□□ 0.69
CCL2P13500 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL2P13500 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL2P13500 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL2P13500 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL2P13500 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCL2P13500 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCL2P13500 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL2P13500 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCL2P13500 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCL2P13500 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL2P13500 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCL2P13500 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.36■□□□□ 0.69
CCL2P13500 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL2P13500 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.36■□□□□ 0.69
CCL2P13500 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL2P13500 AC009086.3-201ENST00000623486 1008 ntBASIC19.36■□□□□ 0.69
CCL2P13500 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL2P13500 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL2P13500 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL2P13500 DUSP8P3-201ENST00000399571 1760 ntBASIC19.36■□□□□ 0.69
CCL2P13500 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL2P13500 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL2P13500 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCL2P13500 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL2P13500 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCL2P13500 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL2P13500 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms