Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT4O95628 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNOT4O95628 LINC01529-204ENST00000636474 1715 ntBASIC19.73■□□□□ 0.75
CNOT4O95628 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT4O95628 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CNOT4O95628 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNOT4O95628 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.72■□□□□ 0.75
CNOT4O95628 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT4O95628 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT4O95628 AC024257.2-201ENST00000549699 147 ntBASIC19.72■□□□□ 0.75
CNOT4O95628 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT4O95628 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CNOT4O95628 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT4O95628 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNOT4O95628 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CNOT4O95628 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.71■□□□□ 0.75
CNOT4O95628 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.71■□□□□ 0.75
CNOT4O95628 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.71■□□□□ 0.75
CNOT4O95628 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 AC136469.2-201ENST00000623944 1028 ntBASIC19.71■□□□□ 0.75
CNOT4O95628 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT4O95628 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.71■□□□□ 0.75
CNOT4O95628 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.71■□□□□ 0.75
CNOT4O95628 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNOT4O95628 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CNOT4O95628 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.7■□□□□ 0.74
CNOT4O95628 MIR3181-201ENST00000578512 73 ntBASIC19.7■□□□□ 0.74
CNOT4O95628 AL499627.2-201ENST00000606283 725 ntBASIC19.7■□□□□ 0.74
CNOT4O95628 AL355001.2-201ENST00000620617 1191 ntBASIC19.7■□□□□ 0.74
CNOT4O95628 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT4O95628 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
CNOT4O95628 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT4O95628 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CNOT4O95628 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT4O95628 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.69■□□□□ 0.74
CNOT4O95628 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT4O95628 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT4O95628 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT4O95628 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT4O95628 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT4O95628 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT4O95628 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT4O95628 ABCB10P4-201ENST00000566803 2184 ntBASIC19.68■□□□□ 0.74
CNOT4O95628 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT4O95628 AC006455.2-201ENST00000429931 906 ntBASIC19.68■□□□□ 0.74
CNOT4O95628 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNOT4O95628 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.68■□□□□ 0.74
CNOT4O95628 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT4O95628 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.68■□□□□ 0.74
CNOT4O95628 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CNOT4O95628 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.67■□□□□ 0.74
CNOT4O95628 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 AC026271.2-201ENST00000428091 497 ntBASIC19.67■□□□□ 0.74
CNOT4O95628 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.67■□□□□ 0.74
CNOT4O95628 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT4O95628 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.66■□□□□ 0.74
CNOT4O95628 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CNOT4O95628 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT4O95628 SUDS3P1-201ENST00000505831 966 ntBASIC19.66■□□□□ 0.74
CNOT4O95628 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT4O95628 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms