Protein–RNA interactions for Protein: O75865

TRAPPC6A, Trafficking protein particle complex subunit 6A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6AO75865 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 LINC01529-204ENST00000636474 1715 ntBASIC20.27■□□□□ 0.84
TRAPPC6AO75865 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 SUDS3P1-201ENST00000505831 966 ntBASIC20.27■□□□□ 0.84
TRAPPC6AO75865 AF213884.3-201ENST00000563833 479 ntBASIC20.27■□□□□ 0.84
TRAPPC6AO75865 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 AL031432.3-201ENST00000607698 485 ntBASIC20.27■□□□□ 0.84
TRAPPC6AO75865 AC136469.2-201ENST00000623944 1028 ntBASIC20.27■□□□□ 0.84
TRAPPC6AO75865 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAPPC6AO75865 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.27■□□□□ 0.83
TRAPPC6AO75865 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 AC008764.7-201ENST00000593779 1081 ntBASIC20.26■□□□□ 0.83
TRAPPC6AO75865 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAPPC6AO75865 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAPPC6AO75865 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 AP001330.3-201ENST00000520123 633 ntBASIC20.24■□□□□ 0.83
TRAPPC6AO75865 AL136967.2-201ENST00000623968 743 ntBASIC20.24■□□□□ 0.83
TRAPPC6AO75865 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRAPPC6AO75865 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 DUX4L4-201ENST00000566884 1269 ntBASIC20.23■□□□□ 0.83
TRAPPC6AO75865 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 AC079630.1-202ENST00000618127 1840 ntBASIC20.23■□□□□ 0.83
TRAPPC6AO75865 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAPPC6AO75865 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 MIR935-201ENST00000401179 91 ntBASIC20.22■□□□□ 0.83
TRAPPC6AO75865 MIR939-201ENST00000401314 82 ntBASIC20.22■□□□□ 0.83
TRAPPC6AO75865 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.22■□□□□ 0.83
TRAPPC6AO75865 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAPPC6AO75865 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 AC133637.1-201ENST00000624115 1537 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms