Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC110285.6-201ENST00000617652 491 ntBASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AL022069.1-201ENST00000568025 1636 ntBASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC092068.2-201ENST00000590491 1708 ntBASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AC131274.2-201ENST00000580697 1507 ntBASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TCRBV4S1A1TA0A5B7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 DUSP8P3-201ENST00000399571 1760 ntBASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PBX2P1-201ENST00000493219 1291 ntBASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 AL117328.2-201ENST00000624617 1940 ntBASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV4S1A1TA0A5B7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV4S1A1TA0A5B7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV4S1A1TA0A5B7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TCRBV4S1A1TA0A5B7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 MIR935-201ENST00000401179 91 ntBASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC005837.3-201ENST00000612163 286 ntBASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV4S1A1TA0A5B7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV4S1A1TA0A5B7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV4S1A1TA0A5B7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms