Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 AC129492.7-201ENST00000622992 756 ntBASIC21.25■□□□□ 0.99
NANOGQ9H9S0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
NANOGQ9H9S0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.24■□□□□ 0.99
NANOGQ9H9S0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 AC007375.3-201ENST00000600936 2314 ntBASIC21.23■□□□□ 0.99
NANOGQ9H9S0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 U85056.1-201ENST00000616429 682 ntBASIC21.23■□□□□ 0.99
NANOGQ9H9S0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.23■□□□□ 0.99
NANOGQ9H9S0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 AC022616.5-201ENST00000518796 181 ntBASIC21.22■□□□□ 0.99
NANOGQ9H9S0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NANOGQ9H9S0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 AC019171.1-201ENST00000601251 1056 ntBASIC21.21■□□□□ 0.99
NANOGQ9H9S0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NANOGQ9H9S0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NANOGQ9H9S0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NANOGQ9H9S0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 AL353803.4-201ENST00000565882 1934 ntBASIC21.19■□□□□ 0.98
NANOGQ9H9S0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
NANOGQ9H9S0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms