Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX6-2Q9C056 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 C11orf96-202ENST00000528572 1834 ntBASIC18.06■□□□□ 0.48
NKX6-2Q9C056 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX6-2Q9C056 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX6-2Q9C056 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 DUX4L29-201ENST00000425409 679 ntBASIC18.04■□□□□ 0.48
NKX6-2Q9C056 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 AC021231.2-201ENST00000594613 730 ntBASIC18.04■□□□□ 0.48
NKX6-2Q9C056 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NKX6-2Q9C056 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MIR6089-201ENST00000616698 64 ntBASIC18.03■□□□□ 0.48
NKX6-2Q9C056 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX6-2Q9C056 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX6-2Q9C056 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX6-2Q9C056 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 AC092068.2-201ENST00000590491 1708 ntBASIC18.01■□□□□ 0.47
NKX6-2Q9C056 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms