Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.63■■□□□ 1.37
SMOQ99835 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMOQ99835 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
SMOQ99835 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMOQ99835 AC133561.4-201ENST00000566112 224 ntBASIC23.62■■□□□ 1.37
SMOQ99835 DUX4L4-201ENST00000566884 1269 ntBASIC23.62■■□□□ 1.37
SMOQ99835 pRNA.6-201ENST00000610482 90 ntBASIC23.62■■□□□ 1.37
SMOQ99835 pRNA.5-201ENST00000612139 90 ntBASIC23.62■■□□□ 1.37
SMOQ99835 pRNA.11-201ENST00000618423 90 ntBASIC23.62■■□□□ 1.37
SMOQ99835 pRNA.13-201ENST00000619112 90 ntBASIC23.62■■□□□ 1.37
SMOQ99835 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.62■■□□□ 1.37
SMOQ99835 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMOQ99835 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SMOQ99835 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SMOQ99835 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMOQ99835 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMOQ99835 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
SMOQ99835 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.61■■□□□ 1.37
SMOQ99835 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.61■■□□□ 1.37
SMOQ99835 AL138724.1-201ENST00000606771 1088 ntBASIC23.61■■□□□ 1.37
SMOQ99835 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SMOQ99835 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SMOQ99835 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMOQ99835 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.6■■□□□ 1.37
SMOQ99835 LINC01529-204ENST00000636474 1715 ntBASIC23.6■■□□□ 1.37
SMOQ99835 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.6■■□□□ 1.37
SMOQ99835 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 AL031432.3-201ENST00000607698 485 ntBASIC23.6■■□□□ 1.37
SMOQ99835 AC005837.3-201ENST00000612163 286 ntBASIC23.6■■□□□ 1.37
SMOQ99835 AC011298.3-201ENST00000615796 283 ntBASIC23.6■■□□□ 1.37
SMOQ99835 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.6■■□□□ 1.37
SMOQ99835 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.6■■□□□ 1.37
SMOQ99835 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.6■■□□□ 1.37
SMOQ99835 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.6■■□□□ 1.37
SMOQ99835 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMOQ99835 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.6■■□□□ 1.37
SMOQ99835 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.59■■□□□ 1.37
SMOQ99835 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.59■■□□□ 1.37
SMOQ99835 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMOQ99835 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
SMOQ99835 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.59■■□□□ 1.37
SMOQ99835 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.58■■□□□ 1.37
SMOQ99835 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SMOQ99835 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMOQ99835 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SMOQ99835 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.58■■□□□ 1.37
SMOQ99835 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.58■■□□□ 1.37
SMOQ99835 MIR4767-201ENST00000582827 78 ntBASIC23.58■■□□□ 1.37
SMOQ99835 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.58■■□□□ 1.37
SMOQ99835 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMOQ99835 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.58■■□□□ 1.36
SMOQ99835 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMOQ99835 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMOQ99835 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.57■■□□□ 1.36
SMOQ99835 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMOQ99835 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMOQ99835 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.57■■□□□ 1.36
SMOQ99835 ANOS2P-203ENST00000472227 1816 ntBASIC23.56■■□□□ 1.36
SMOQ99835 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
SMOQ99835 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.56■■□□□ 1.36
SMOQ99835 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMOQ99835 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMOQ99835 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SMOQ99835 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.56■■□□□ 1.36
SMOQ99835 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.56■■□□□ 1.36
SMOQ99835 AL499627.2-201ENST00000606283 725 ntBASIC23.56■■□□□ 1.36
SMOQ99835 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
SMOQ99835 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SMOQ99835 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
SMOQ99835 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.56■■□□□ 1.36
SMOQ99835 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMOQ99835 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.55■■□□□ 1.36
SMOQ99835 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.55■■□□□ 1.36
SMOQ99835 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
SMOQ99835 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.55■■□□□ 1.36
SMOQ99835 AC136469.2-201ENST00000623944 1028 ntBASIC23.55■■□□□ 1.36
SMOQ99835 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.55■■□□□ 1.36
SMOQ99835 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SMOQ99835 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMOQ99835 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.54■■□□□ 1.36
SMOQ99835 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.54■■□□□ 1.36
SMOQ99835 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMOQ99835 EDA-201ENST00000338901 1233 ntBASIC23.54■■□□□ 1.36
SMOQ99835 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms