Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.01■■□□□ 1.11
SYVN1Q86TM6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SYVN1Q86TM6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22■■□□□ 1.11
SYVN1Q86TM6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 AL136116.3-201ENST00000402907 1138 ntBASIC22■■□□□ 1.11
SYVN1Q86TM6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22■■□□□ 1.11
SYVN1Q86TM6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22■■□□□ 1.11
SYVN1Q86TM6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22■■□□□ 1.11
SYVN1Q86TM6 AL139246.5-201ENST00000606645 996 ntBASIC22■■□□□ 1.11
SYVN1Q86TM6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22■■□□□ 1.11
SYVN1Q86TM6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22■■□□□ 1.11
SYVN1Q86TM6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SYVN1Q86TM6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SYVN1Q86TM6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 MIR638-201ENST00000385237 100 ntBASIC21.97■■□□□ 1.11
SYVN1Q86TM6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SYVN1Q86TM6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SYVN1Q86TM6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SYVN1Q86TM6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
SYVN1Q86TM6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYVN1Q86TM6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYVN1Q86TM6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms