Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
CROCCP2Q86T23 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CROCCP2Q86T23 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 AC016575.1-201ENST00000607026 382 ntBASIC22.75■■□□□ 1.23
CROCCP2Q86T23 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CROCCP2Q86T23 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 RPS2P35-201ENST00000443417 897 ntBASIC22.74■■□□□ 1.23
CROCCP2Q86T23 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CROCCP2Q86T23 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CROCCP2Q86T23 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.72■■□□□ 1.23
CROCCP2Q86T23 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 AL137060.1-201ENST00000618151 2648 ntBASIC22.71■■□□□ 1.23
CROCCP2Q86T23 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.71■■□□□ 1.23
CROCCP2Q86T23 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.23
CROCCP2Q86T23 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
CROCCP2Q86T23 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CROCCP2Q86T23 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 RPS2P7-201ENST00000447334 885 ntBASIC22.69■■□□□ 1.22
CROCCP2Q86T23 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CROCCP2Q86T23 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 AC079630.1-202ENST00000618127 1840 ntBASIC22.68■■□□□ 1.22
CROCCP2Q86T23 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CROCCP2Q86T23 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms