Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 EDA-201ENST00000338901 1233 ntBASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 pRNA.6-201ENST00000610482 90 ntBASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 pRNA.5-201ENST00000612139 90 ntBASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 pRNA.11-201ENST00000618423 90 ntBASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 pRNA.13-201ENST00000619112 90 ntBASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LIMS2Q7Z4I7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 MIR4767-201ENST00000582827 78 ntBASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
LIMS2Q7Z4I7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LIMS2Q7Z4I7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.83■■□□□ 1.41
LIMS2Q7Z4I7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LIMS2Q7Z4I7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.83■■□□□ 1.4
LIMS2Q7Z4I7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.4
LIMS2Q7Z4I7 AC092068.2-201ENST00000590491 1708 ntBASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 AL355001.2-201ENST00000620617 1191 ntBASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 ANOS2P-203ENST00000472227 1816 ntBASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.82■■□□□ 1.4
LIMS2Q7Z4I7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LIMS2Q7Z4I7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 AL136967.2-201ENST00000623968 743 ntBASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LIMS2Q7Z4I7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 MIR939-201ENST00000401314 82 ntBASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.79■■□□□ 1.4
LIMS2Q7Z4I7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 AP001330.3-201ENST00000520123 633 ntBASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 AL353803.4-201ENST00000565882 1934 ntBASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 AC133637.1-201ENST00000624115 1537 ntBASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LIMS2Q7Z4I7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms