Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LIN54Q6MZP7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.11■□□□□ 0.65
LIN54Q6MZP7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN54Q6MZP7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIN54Q6MZP7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 U85056.1-201ENST00000616429 682 ntBASIC19.09■□□□□ 0.65
LIN54Q6MZP7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.09■□□□□ 0.65
LIN54Q6MZP7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN54Q6MZP7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN54Q6MZP7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 KRT18P10-201ENST00000388836 1287 ntBASIC19.08■□□□□ 0.64
LIN54Q6MZP7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 AL592293.1-201ENST00000502889 1188 ntBASIC19.08■□□□□ 0.64
LIN54Q6MZP7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.08■□□□□ 0.64
LIN54Q6MZP7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.07■□□□□ 0.64
LIN54Q6MZP7 AC092068.2-201ENST00000590491 1708 ntBASIC19.07■□□□□ 0.64
LIN54Q6MZP7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIN54Q6MZP7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LIN54Q6MZP7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms