Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 AC010997.5-201ENST00000609182 354 ntBASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 AL035685.1-201ENST00000636663 812 ntBASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNAI3Q3KNW1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI3Q3KNW1 C1orf229-201ENST00000623686 2258 ntBASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNAI3Q3KNW1 AC144652.1-201ENST00000609974 1624 ntBASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 UNC93B8-201ENST00000511903 705 ntBASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNAI3Q3KNW1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNAI3Q3KNW1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNAI3Q3KNW1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNAI3Q3KNW1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
SNAI3Q3KNW1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SNAI3Q3KNW1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNAI3Q3KNW1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAI3Q3KNW1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAI3Q3KNW1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms