Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MTHFD2P13995 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFD2P13995 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFD2P13995 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.91■■□□□ 1.1
MTHFD2P13995 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFD2P13995 EP400NL-214ENST00000641289 2402 ntBASIC21.91■■□□□ 1.1
MTHFD2P13995 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.91■■□□□ 1.1
MTHFD2P13995 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MTHFD2P13995 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFD2P13995 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
MTHFD2P13995 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFD2P13995 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFD2P13995 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.9■■□□□ 1.1
MTHFD2P13995 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFD2P13995 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MTHFD2P13995 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MTHFD2P13995 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MTHFD2P13995 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
MTHFD2P13995 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFD2P13995 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFD2P13995 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.89■■□□□ 1.09
MTHFD2P13995 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.89■■□□□ 1.09
MTHFD2P13995 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MTHFD2P13995 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.89■■□□□ 1.09
MTHFD2P13995 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MTHFD2P13995 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
MTHFD2P13995 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFD2P13995 AC144652.1-201ENST00000609974 1624 ntBASIC21.88■■□□□ 1.09
MTHFD2P13995 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.88■■□□□ 1.09
MTHFD2P13995 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MTHFD2P13995 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.88■■□□□ 1.09
MTHFD2P13995 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFD2P13995 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MTHFD2P13995 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
MTHFD2P13995 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFD2P13995 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.88■■□□□ 1.09
MTHFD2P13995 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFD2P13995 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.88■■□□□ 1.09
MTHFD2P13995 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.88■■□□□ 1.09
MTHFD2P13995 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MTHFD2P13995 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MTHFD2P13995 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.87■■□□□ 1.09
MTHFD2P13995 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFD2P13995 GUSBP5-202ENST00000510805 1989 ntBASIC21.87■■□□□ 1.09
MTHFD2P13995 BX664725.1-201ENST00000438252 379 ntBASIC21.87■■□□□ 1.09
MTHFD2P13995 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFD2P13995 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MTHFD2P13995 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MTHFD2P13995 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.86■■□□□ 1.09
MTHFD2P13995 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MTHFD2P13995 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
MTHFD2P13995 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MTHFD2P13995 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.86■■□□□ 1.09
MTHFD2P13995 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.86■■□□□ 1.09
MTHFD2P13995 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.86■■□□□ 1.09
MTHFD2P13995 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD2P13995 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD2P13995 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD2P13995 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD2P13995 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
MTHFD2P13995 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
MTHFD2P13995 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.85■■□□□ 1.09
MTHFD2P13995 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 AC005703.6-201ENST00000623265 1329 ntBASIC21.84■■□□□ 1.09
MTHFD2P13995 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
MTHFD2P13995 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MTHFD2P13995 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.84■■□□□ 1.09
MTHFD2P13995 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.84■■□□□ 1.09
MTHFD2P13995 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.84■■□□□ 1.09
MTHFD2P13995 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MTHFD2P13995 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD2P13995 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD2P13995 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD2P13995 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD2P13995 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.83■■□□□ 1.09
MTHFD2P13995 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.83■■□□□ 1.09
MTHFD2P13995 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.83■■□□□ 1.09
MTHFD2P13995 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.83■■□□□ 1.09
MTHFD2P13995 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
MTHFD2P13995 AC092028.1-203ENST00000608262 953 ntBASIC21.83■■□□□ 1.09
MTHFD2P13995 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.83■■□□□ 1.09
MTHFD2P13995 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MTHFD2P13995 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
MTHFD2P13995 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MTHFD2P13995 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
MTHFD2P13995 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
MTHFD2P13995 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.83■■□□□ 1.08
MTHFD2P13995 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
MTHFD2P13995 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
MTHFD2P13995 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
MTHFD2P13995 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD2P13995 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD2P13995 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms