Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19■□□□□ 0.63
CD3DP04234 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19■□□□□ 0.63
CD3DP04234 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
CD3DP04234 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CD3DP04234 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CD3DP04234 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.99■□□□□ 0.63
CD3DP04234 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.99■□□□□ 0.63
CD3DP04234 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.99■□□□□ 0.63
CD3DP04234 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CD3DP04234 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.99■□□□□ 0.63
CD3DP04234 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CD3DP04234 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD3DP04234 ALDH1A3-203ENST00000557963 1670 ntBASIC18.98■□□□□ 0.63
CD3DP04234 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.98■□□□□ 0.63
CD3DP04234 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CD3DP04234 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.98■□□□□ 0.63
CD3DP04234 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.98■□□□□ 0.63
CD3DP04234 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD3DP04234 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.97■□□□□ 0.63
CD3DP04234 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 FBXW4P1-201ENST00000426721 2239 ntBASIC18.97■□□□□ 0.63
CD3DP04234 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.97■□□□□ 0.63
CD3DP04234 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CD3DP04234 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.97■□□□□ 0.63
CD3DP04234 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CD3DP04234 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
CD3DP04234 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.97■□□□□ 0.63
CD3DP04234 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD3DP04234 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CD3DP04234 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.96■□□□□ 0.63
CD3DP04234 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
CD3DP04234 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.96■□□□□ 0.63
CD3DP04234 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.96■□□□□ 0.63
CD3DP04234 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD3DP04234 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CD3DP04234 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CD3DP04234 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.95■□□□□ 0.62
CD3DP04234 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.95■□□□□ 0.62
CD3DP04234 AC022413.1-201ENST00000624602 984 ntBASIC18.95■□□□□ 0.62
CD3DP04234 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.95■□□□□ 0.62
CD3DP04234 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.95■□□□□ 0.62
CD3DP04234 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD3DP04234 SLC25A24-204ENST00000569674 2357 ntBASIC18.95■□□□□ 0.62
CD3DP04234 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.94■□□□□ 0.62
CD3DP04234 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
CD3DP04234 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CD3DP04234 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD3DP04234 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CD3DP04234 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CD3DP04234 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms