Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFA1O15239 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFA1O15239 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFA1O15239 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA1O15239 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA1O15239 RPS2P7-201ENST00000447334 885 ntBASIC15.28■□□□□ 0.04
NDUFA1O15239 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NDUFA1O15239 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA1O15239 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NDUFA1O15239 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFA1O15239 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA1O15239 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA1O15239 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA1O15239 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA1O15239 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA1O15239 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.27■□□□□ 0.04
NDUFA1O15239 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.27■□□□□ 0.04
NDUFA1O15239 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
NDUFA1O15239 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.27■□□□□ 0.04
NDUFA1O15239 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NDUFA1O15239 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NDUFA1O15239 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NDUFA1O15239 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.27■□□□□ 0.03
NDUFA1O15239 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.27■□□□□ 0.03
NDUFA1O15239 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA1O15239 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA1O15239 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA1O15239 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NDUFA1O15239 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.26■□□□□ 0.03
NDUFA1O15239 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA1O15239 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.26■□□□□ 0.03
NDUFA1O15239 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NDUFA1O15239 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.26■□□□□ 0.03
NDUFA1O15239 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.26■□□□□ 0.03
NDUFA1O15239 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA1O15239 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA1O15239 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA1O15239 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA1O15239 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA1O15239 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA1O15239 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA1O15239 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NDUFA1O15239 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA1O15239 AL592295.1-201ENST00000400984 884 ntBASIC15.25■□□□□ 0.03
NDUFA1O15239 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA1O15239 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
NDUFA1O15239 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA1O15239 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA1O15239 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA1O15239 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA1O15239 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFA1O15239 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFA1O15239 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NDUFA1O15239 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFA1O15239 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.24■□□□□ 0.03
NDUFA1O15239 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NDUFA1O15239 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 AL592293.1-201ENST00000502889 1188 ntBASIC15.24■□□□□ 0.03
NDUFA1O15239 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFA1O15239 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA1O15239 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms