Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.63■■■□□ 2.01
PPP4R1Q8TF05 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PPP4R1Q8TF05 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.61■■■□□ 2.01
PPP4R1Q8TF05 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PPP4R1Q8TF05 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PPP4R1Q8TF05 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
PPP4R1Q8TF05 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
PPP4R1Q8TF05 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.58■■■□□ 2.01
PPP4R1Q8TF05 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.57■■■□□ 2
PPP4R1Q8TF05 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PPP4R1Q8TF05 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PPP4R1Q8TF05 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.56■■■□□ 2
PPP4R1Q8TF05 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
PPP4R1Q8TF05 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.53■■■□□ 2
PPP4R1Q8TF05 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
PPP4R1Q8TF05 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PPP4R1Q8TF05 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PPP4R1Q8TF05 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
PPP4R1Q8TF05 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
PPP4R1Q8TF05 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.48■■□□□ 1.99
PPP4R1Q8TF05 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PPP4R1Q8TF05 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
PPP4R1Q8TF05 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PPP4R1Q8TF05 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PPP4R1Q8TF05 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PPP4R1Q8TF05 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.45■■□□□ 1.98
PPP4R1Q8TF05 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PPP4R1Q8TF05 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PPP4R1Q8TF05 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.44■■□□□ 1.98
PPP4R1Q8TF05 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PPP4R1Q8TF05 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.42■■□□□ 1.98
PPP4R1Q8TF05 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PPP4R1Q8TF05 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
PPP4R1Q8TF05 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.38■■□□□ 1.97
PPP4R1Q8TF05 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PPP4R1Q8TF05 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
PPP4R1Q8TF05 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.36■■□□□ 1.97
PPP4R1Q8TF05 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PPP4R1Q8TF05 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.36■■□□□ 1.97
PPP4R1Q8TF05 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PPP4R1Q8TF05 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.35■■□□□ 1.97
PPP4R1Q8TF05 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PPP4R1Q8TF05 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PPP4R1Q8TF05 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PPP4R1Q8TF05 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.32■■□□□ 1.96
PPP4R1Q8TF05 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.31■■□□□ 1.96
PPP4R1Q8TF05 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.31■■□□□ 1.96
PPP4R1Q8TF05 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PPP4R1Q8TF05 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.31■■□□□ 1.96
PPP4R1Q8TF05 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.28■■□□□ 1.96
PPP4R1Q8TF05 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
PPP4R1Q8TF05 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PPP4R1Q8TF05 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.26■■□□□ 1.95
PPP4R1Q8TF05 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R1Q8TF05 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PPP4R1Q8TF05 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R1Q8TF05 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PPP4R1Q8TF05 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.24■■□□□ 1.95
PPP4R1Q8TF05 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PPP4R1Q8TF05 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PPP4R1Q8TF05 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.2■■□□□ 1.95
PPP4R1Q8TF05 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PPP4R1Q8TF05 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.2■■□□□ 1.95
PPP4R1Q8TF05 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PPP4R1Q8TF05 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.2■■□□□ 1.94
PPP4R1Q8TF05 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
PPP4R1Q8TF05 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PPP4R1Q8TF05 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.17■■□□□ 1.94
PPP4R1Q8TF05 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PPP4R1Q8TF05 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R1Q8TF05 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R1Q8TF05 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.15■■□□□ 1.94
PPP4R1Q8TF05 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R1Q8TF05 AC120057.4-201ENST00000624722 1615 ntBASIC27.14■■□□□ 1.94
PPP4R1Q8TF05 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R1Q8TF05 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
PPP4R1Q8TF05 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R1Q8TF05 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R1Q8TF05 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4R1Q8TF05 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
PPP4R1Q8TF05 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.11■■□□□ 1.93
PPP4R1Q8TF05 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PPP4R1Q8TF05 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R1Q8TF05 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R1Q8TF05 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PPP4R1Q8TF05 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.1■■□□□ 1.93
PPP4R1Q8TF05 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R1Q8TF05 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R1Q8TF05 ABCB10P1-201ENST00000614297 2181 ntBASIC27.09■■□□□ 1.93
PPP4R1Q8TF05 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R1Q8TF05 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R1Q8TF05 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
PPP4R1Q8TF05 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
PPP4R1Q8TF05 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 DYNLL1-208ENST00000550178 581 ntBASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R1Q8TF05 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms