Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF6Q9Y252 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF6Q9Y252 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF6Q9Y252 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF6Q9Y252 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF6Q9Y252 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF6Q9Y252 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF6Q9Y252 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF6Q9Y252 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF6Q9Y252 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF6Q9Y252 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF6Q9Y252 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF6Q9Y252 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF6Q9Y252 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF6Q9Y252 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF6Q9Y252 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF6Q9Y252 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF6Q9Y252 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF6Q9Y252 LINC00565-201ENST00000562710 2331 ntBASIC21.03■□□□□ 0.96
RNF6Q9Y252 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF6Q9Y252 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF6Q9Y252 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF6Q9Y252 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF6Q9Y252 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF6Q9Y252 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF6Q9Y252 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF6Q9Y252 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF6Q9Y252 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
RNF6Q9Y252 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF6Q9Y252 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF6Q9Y252 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF6Q9Y252 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF6Q9Y252 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RNF6Q9Y252 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF6Q9Y252 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF6Q9Y252 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF6Q9Y252 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 MIR935-201ENST00000401179 91 ntBASIC21.01■□□□□ 0.95
RNF6Q9Y252 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 AC010997.5-201ENST00000609182 354 ntBASIC21.01■□□□□ 0.95
RNF6Q9Y252 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF6Q9Y252 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF6Q9Y252 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF6Q9Y252 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF6Q9Y252 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21■□□□□ 0.95
RNF6Q9Y252 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF6Q9Y252 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21■□□□□ 0.95
RNF6Q9Y252 AC131281.2-201ENST00000520478 145 ntBASIC21■□□□□ 0.95
RNF6Q9Y252 AC011551.1-201ENST00000614101 683 ntBASIC21■□□□□ 0.95
RNF6Q9Y252 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF6Q9Y252 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21■□□□□ 0.95
RNF6Q9Y252 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RNF6Q9Y252 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF6Q9Y252 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF6Q9Y252 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF6Q9Y252 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF6Q9Y252 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF6Q9Y252 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF6Q9Y252 MTDHP2-201ENST00000601468 714 ntBASIC20.99■□□□□ 0.95
RNF6Q9Y252 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF6Q9Y252 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF6Q9Y252 ANOS2P-203ENST00000472227 1816 ntBASIC20.99■□□□□ 0.95
RNF6Q9Y252 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF6Q9Y252 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF6Q9Y252 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF6Q9Y252 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms