Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PARPBPQ9NWS1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PARPBPQ9NWS1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PARPBPQ9NWS1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 AC008406.3-201ENST00000620001 1374 ntBASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PARPBPQ9NWS1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PARPBPQ9NWS1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PARPBPQ9NWS1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PARPBPQ9NWS1 AC009102.2-201ENST00000606772 1639 ntBASIC20■□□□□ 0.79
PARPBPQ9NWS1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PARPBPQ9NWS1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20■□□□□ 0.79
PARPBPQ9NWS1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PARPBPQ9NWS1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PARPBPQ9NWS1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 AC131281.2-201ENST00000520478 145 ntBASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 AL512631.2-201ENST00000604634 923 ntBASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
PARPBPQ9NWS1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 AC092171.4-201ENST00000609130 632 ntBASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.96■□□□□ 0.79
PARPBPQ9NWS1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.95■□□□□ 0.79
PARPBPQ9NWS1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 AC241377.3-202ENST00000626088 1088 ntBASIC19.95■□□□□ 0.78
PARPBPQ9NWS1 AC241585.3-202ENST00000628937 1088 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms