Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NDST4Q9H3R1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 AL117328.2-201ENST00000624617 1940 ntBASIC24.53■■□□□ 1.52
NDST4Q9H3R1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NDST4Q9H3R1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 AL031848.2-201ENST00000607670 837 ntBASIC24.52■■□□□ 1.52
NDST4Q9H3R1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NDST4Q9H3R1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NDST4Q9H3R1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.5■■□□□ 1.51
NDST4Q9H3R1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NDST4Q9H3R1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NDST4Q9H3R1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
NDST4Q9H3R1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
NDST4Q9H3R1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.48■■□□□ 1.51
NDST4Q9H3R1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.48■■□□□ 1.51
NDST4Q9H3R1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.48■■□□□ 1.51
NDST4Q9H3R1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NDST4Q9H3R1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 AL353803.4-201ENST00000565882 1934 ntBASIC24.47■■□□□ 1.51
NDST4Q9H3R1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
NDST4Q9H3R1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NDST4Q9H3R1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
NDST4Q9H3R1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 AC021242.3-201ENST00000607598 1377 ntBASIC24.44■■□□□ 1.5
NDST4Q9H3R1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
NDST4Q9H3R1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NDST4Q9H3R1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms