Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNX30Q5VWJ9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 AL136162.1-201ENST00000607711 1078 ntBASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 AC241377.3-202ENST00000626088 1088 ntBASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 AC241585.3-202ENST00000628937 1088 ntBASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 AC245100.8-202ENST00000629247 1058 ntBASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNX30Q5VWJ9 LINC00543-201ENST00000567234 1845 ntBASIC23.64■■□□□ 1.38
SNX30Q5VWJ9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNX30Q5VWJ9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNX30Q5VWJ9 AC099791.2-201ENST00000605725 427 ntBASIC23.64■■□□□ 1.37
SNX30Q5VWJ9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.64■■□□□ 1.37
SNX30Q5VWJ9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
SNX30Q5VWJ9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.64■■□□□ 1.37
SNX30Q5VWJ9 AC135279.3-201ENST00000610945 1311 ntBASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 AC012676.1-201ENST00000574705 1949 ntBASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SNX30Q5VWJ9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 AC024257.2-201ENST00000549699 147 ntBASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.62■■□□□ 1.37
SNX30Q5VWJ9 SYT6-210ENST00000641643 1587 ntBASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 AL138724.1-201ENST00000606771 1088 ntBASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 AL031432.3-201ENST00000607698 485 ntBASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX30Q5VWJ9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.6■■□□□ 1.37
SNX30Q5VWJ9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 EDA-201ENST00000338901 1233 ntBASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX30Q5VWJ9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 SERBP1P1-201ENST00000396021 1160 ntBASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 SUDS3P1-201ENST00000505831 966 ntBASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX30Q5VWJ9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms