Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KRT18P10-201ENST00000388836 1287 ntBASIC19.3■□□□□ 0.68
AP3S2P59780 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
AP3S2P59780 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.3■□□□□ 0.68
AP3S2P59780 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3S2P59780 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
AP3S2P59780 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.29■□□□□ 0.68
AP3S2P59780 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.29■□□□□ 0.68
AP3S2P59780 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP3S2P59780 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
AP3S2P59780 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3S2P59780 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S2P59780 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
AP3S2P59780 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S2P59780 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3S2P59780 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3S2P59780 C11orf96-202ENST00000528572 1834 ntBASIC19.28■□□□□ 0.68
AP3S2P59780 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3S2P59780 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3S2P59780 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.28■□□□□ 0.68
AP3S2P59780 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S2P59780 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AP3S2P59780 AC092053.2-201ENST00000640557 1818 ntBASIC19.28■□□□□ 0.68
AP3S2P59780 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S2P59780 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3S2P59780 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3S2P59780 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
AP3S2P59780 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 AC025884.2-201ENST00000553429 711 ntBASIC19.27■□□□□ 0.68
AP3S2P59780 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
AP3S2P59780 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
AP3S2P59780 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
AP3S2P59780 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S2P59780 SLC25A24-204ENST00000569674 2357 ntBASIC19.27■□□□□ 0.67
AP3S2P59780 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP3S2P59780 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S2P59780 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S2P59780 AL162393.1-201ENST00000437852 946 ntBASIC19.26■□□□□ 0.67
AP3S2P59780 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S2P59780 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S2P59780 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP3S2P59780 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3S2P59780 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
AP3S2P59780 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3S2P59780 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3S2P59780 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
AP3S2P59780 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S2P59780 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AP3S2P59780 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S2P59780 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S2P59780 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S2P59780 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S2P59780 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S2P59780 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
AP3S2P59780 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
AP3S2P59780 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.23■□□□□ 0.67
AP3S2P59780 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S2P59780 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.22■□□□□ 0.67
AP3S2P59780 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S2P59780 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.22■□□□□ 0.67
AP3S2P59780 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S2P59780 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S2P59780 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S2P59780 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S2P59780 DUX4L11-201ENST00000611504 1267 ntBASIC19.22■□□□□ 0.67
AP3S2P59780 DUX4L12-201ENST00000614593 1267 ntBASIC19.22■□□□□ 0.67
AP3S2P59780 DUX4L14-201ENST00000621227 1267 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms