Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDH6P55285 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.4■■□□□ 1.34
CDH6P55285 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDH6P55285 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.4■■□□□ 1.34
CDH6P55285 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CDH6P55285 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.4■■□□□ 1.34
CDH6P55285 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDH6P55285 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CDH6P55285 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CDH6P55285 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDH6P55285 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.39■■□□□ 1.34
CDH6P55285 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDH6P55285 AC005703.6-201ENST00000623265 1329 ntBASIC23.39■■□□□ 1.34
CDH6P55285 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.39■■□□□ 1.34
CDH6P55285 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDH6P55285 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.39■■□□□ 1.33
CDH6P55285 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.39■■□□□ 1.33
CDH6P55285 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDH6P55285 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.39■■□□□ 1.33
CDH6P55285 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
CDH6P55285 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH6P55285 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH6P55285 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH6P55285 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.38■■□□□ 1.33
CDH6P55285 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDH6P55285 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDH6P55285 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDH6P55285 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH6P55285 MTDHP2-201ENST00000601468 714 ntBASIC23.37■■□□□ 1.33
CDH6P55285 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH6P55285 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDH6P55285 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.37■■□□□ 1.33
CDH6P55285 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDH6P55285 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.36■■□□□ 1.33
CDH6P55285 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.36■■□□□ 1.33
CDH6P55285 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDH6P55285 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDH6P55285 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDH6P55285 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.36■■□□□ 1.33
CDH6P55285 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CDH6P55285 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
CDH6P55285 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH6P55285 TSPY9P-201ENST00000440215 945 ntBASIC23.35■■□□□ 1.33
CDH6P55285 TSPY11P-201ENST00000442607 1045 ntBASIC23.35■■□□□ 1.33
CDH6P55285 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDH6P55285 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.35■■□□□ 1.33
CDH6P55285 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDH6P55285 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.35■■□□□ 1.33
CDH6P55285 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 AC012676.1-201ENST00000574705 1949 ntBASIC23.34■■□□□ 1.33
CDH6P55285 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.34■■□□□ 1.33
CDH6P55285 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CDH6P55285 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDH6P55285 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.33■■□□□ 1.33
CDH6P55285 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.33■■□□□ 1.33
CDH6P55285 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDH6P55285 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.33■■□□□ 1.33
CDH6P55285 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.33■■□□□ 1.33
CDH6P55285 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CDH6P55285 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDH6P55285 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CDH6P55285 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CDH6P55285 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.32■■□□□ 1.32
CDH6P55285 AC010997.5-201ENST00000609182 354 ntBASIC23.32■■□□□ 1.32
CDH6P55285 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH6P55285 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDH6P55285 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.32■■□□□ 1.32
CDH6P55285 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH6P55285 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH6P55285 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH6P55285 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.31■■□□□ 1.32
CDH6P55285 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CDH6P55285 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDH6P55285 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.31■■□□□ 1.32
CDH6P55285 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH6P55285 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDH6P55285 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDH6P55285 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CDH6P55285 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 634.3 ms