Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
USP6P35125 DUX4L2-201ENST00000561772 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.81■■■□□ 2.52
USP6P35125 DUX4L6-201ENST00000626483 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4L1-201ENST00000627662 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4L8-201ENST00000629013 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4L3-201ENST00000630187 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4L7-201ENST00000630678 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 DUX4L5-201ENST00000630834 1275 ntBASIC30.81■■■□□ 2.52
USP6P35125 AC133637.1-201ENST00000624115 1537 ntBASIC30.81■■■□□ 2.52
USP6P35125 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.8■■■□□ 2.52
USP6P35125 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
USP6P35125 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.8■■■□□ 2.52
USP6P35125 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.8■■■□□ 2.52
USP6P35125 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP6P35125 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
USP6P35125 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
USP6P35125 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
USP6P35125 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP6P35125 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.79■■■□□ 2.52
USP6P35125 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.79■■■□□ 2.52
USP6P35125 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP6P35125 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
USP6P35125 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
USP6P35125 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP6P35125 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
USP6P35125 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
USP6P35125 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
USP6P35125 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.78■■■□□ 2.52
USP6P35125 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP6P35125 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.78■■■□□ 2.52
USP6P35125 AC012414.1-201ENST00000556676 535 ntBASIC30.78■■■□□ 2.52
USP6P35125 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.78■■■□□ 2.52
USP6P35125 AC135731.1-201ENST00000569415 2548 ntBASIC30.78■■■□□ 2.52
USP6P35125 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP6P35125 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP6P35125 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.77■■■□□ 2.52
USP6P35125 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP6P35125 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.77■■■□□ 2.52
USP6P35125 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP6P35125 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP6P35125 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.77■■■□□ 2.52
USP6P35125 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.76■■■□□ 2.52
USP6P35125 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
USP6P35125 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.76■■■□□ 2.51
USP6P35125 MIR572-201ENST00000384983 95 ntBASIC30.76■■■□□ 2.51
USP6P35125 OR2I1P-207ENST00000453522 948 ntBASIC30.76■■■□□ 2.51
USP6P35125 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
USP6P35125 AC010525.1-201ENST00000585559 441 ntBASIC30.76■■■□□ 2.51
USP6P35125 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.76■■■□□ 2.51
USP6P35125 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
USP6P35125 AL358852.1-201ENST00000623174 1268 ntBASIC30.76■■■□□ 2.51
USP6P35125 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
USP6P35125 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.76■■■□□ 2.51
USP6P35125 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.76■■■□□ 2.51
USP6P35125 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP6P35125 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP6P35125 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.75■■■□□ 2.51
USP6P35125 IKBKGP1-201ENST00000612193 1073 ntBASIC30.75■■■□□ 2.51
USP6P35125 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.75■■■□□ 2.51
USP6P35125 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
USP6P35125 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP6P35125 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP6P35125 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.74■■■□□ 2.51
USP6P35125 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP6P35125 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.74■■■□□ 2.51
USP6P35125 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC30.74■■■□□ 2.51
USP6P35125 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC30.74■■■□□ 2.51
USP6P35125 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP6P35125 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.74■■■□□ 2.51
USP6P35125 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.74■■■□□ 2.51
USP6P35125 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
USP6P35125 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP6P35125 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
USP6P35125 MIR6084-201ENST00000622012 110 ntBASIC30.73■■■□□ 2.51
USP6P35125 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP6P35125 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
USP6P35125 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP6P35125 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
USP6P35125 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
USP6P35125 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
USP6P35125 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.73■■■□□ 2.51
USP6P35125 AC092437.1-201ENST00000624794 1048 ntBASIC30.73■■■□□ 2.51
USP6P35125 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.72■■■□□ 2.51
USP6P35125 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.72■■■□□ 2.51
USP6P35125 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.72■■■□□ 2.51
USP6P35125 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
USP6P35125 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.72■■■□□ 2.51
USP6P35125 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
USP6P35125 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USP6P35125 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USP6P35125 AC123595.1-201ENST00000440769 1046 ntBASIC30.72■■■□□ 2.51
USP6P35125 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.72■■■□□ 2.51
USP6P35125 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
USP6P35125 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.71■■■□□ 2.51
USP6P35125 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC30.71■■■□□ 2.51
USP6P35125 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
USP6P35125 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.71■■■□□ 2.51
USP6P35125 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.71■■■□□ 2.51
USP6P35125 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms