Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC12P31275 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC12P31275 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HOXC12P31275 SRD5A1P1-201ENST00000442297 786 ntBASIC19.88■□□□□ 0.77
HOXC12P31275 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXC12P31275 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.88■□□□□ 0.77
HOXC12P31275 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC12P31275 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC12P31275 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 EDA-201ENST00000338901 1233 ntBASIC19.87■□□□□ 0.77
HOXC12P31275 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HOXC12P31275 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC12P31275 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC12P31275 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HOXC12P31275 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HOXC12P31275 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXC12P31275 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC12P31275 AL355001.2-201ENST00000620617 1191 ntBASIC19.86■□□□□ 0.77
HOXC12P31275 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.86■□□□□ 0.77
HOXC12P31275 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.86■□□□□ 0.77
HOXC12P31275 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
HOXC12P31275 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXC12P31275 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC12P31275 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC12P31275 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC12P31275 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HOXC12P31275 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC12P31275 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXC12P31275 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC12P31275 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
HOXC12P31275 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HOXC12P31275 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC12P31275 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
HOXC12P31275 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC12P31275 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC12P31275 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC12P31275 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC12P31275 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC12P31275 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC12P31275 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HOXC12P31275 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HOXC12P31275 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.83■□□□□ 0.77
HOXC12P31275 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC12P31275 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC12P31275 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC12P31275 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC12P31275 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXC12P31275 AC092171.4-201ENST00000609130 632 ntBASIC19.82■□□□□ 0.76
HOXC12P31275 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HOXC12P31275 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXC12P31275 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
HOXC12P31275 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC12P31275 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC12P31275 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXC12P31275 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC12P31275 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC12P31275 AC024257.2-201ENST00000549699 147 ntBASIC19.81■□□□□ 0.76
HOXC12P31275 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXC12P31275 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXC12P31275 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC12P31275 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC12P31275 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC12P31275 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC12P31275 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC12P31275 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC12P31275 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXC12P31275 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXC12P31275 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXC12P31275 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HOXC12P31275 AC105265.2-201ENST00000467189 838 ntBASIC19.8■□□□□ 0.76
HOXC12P31275 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXC12P31275 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC12P31275 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms