Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LINGO3P0C6S8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 AC087393.1-201ENST00000582896 145 ntBASIC21.62■■□□□ 1.05
LINGO3P0C6S8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINGO3P0C6S8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.61■■□□□ 1.05
LINGO3P0C6S8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINGO3P0C6S8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.61■■□□□ 1.05
LINGO3P0C6S8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINGO3P0C6S8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LINGO3P0C6S8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LINGO3P0C6S8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINGO3P0C6S8 AL033527.3-201ENST00000566366 1196 ntBASIC21.59■■□□□ 1.05
LINGO3P0C6S8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINGO3P0C6S8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
LINGO3P0C6S8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINGO3P0C6S8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINGO3P0C6S8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINGO3P0C6S8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINGO3P0C6S8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINGO3P0C6S8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LINGO3P0C6S8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LINGO3P0C6S8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINGO3P0C6S8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINGO3P0C6S8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINGO3P0C6S8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINGO3P0C6S8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINGO3P0C6S8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms