Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LRRC53A6NM62 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRRC53A6NM62 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRRC53A6NM62 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRRC53A6NM62 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
LRRC53A6NM62 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.28■■□□□ 1.48
LRRC53A6NM62 AC012354.3-201ENST00000623734 483 ntBASIC24.28■■□□□ 1.48
LRRC53A6NM62 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
LRRC53A6NM62 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRRC53A6NM62 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRRC53A6NM62 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRRC53A6NM62 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRRC53A6NM62 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRRC53A6NM62 AL033527.3-201ENST00000566366 1196 ntBASIC24.27■■□□□ 1.48
LRRC53A6NM62 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.27■■□□□ 1.48
LRRC53A6NM62 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRRC53A6NM62 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 AC103834.1-201ENST00000520383 144 ntBASIC24.26■■□□□ 1.47
LRRC53A6NM62 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
LRRC53A6NM62 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRRC53A6NM62 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC53A6NM62 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.25■■□□□ 1.47
LRRC53A6NM62 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC53A6NM62 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.25■■□□□ 1.47
LRRC53A6NM62 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC53A6NM62 GUSBP5-202ENST00000510805 1989 ntBASIC24.25■■□□□ 1.47
LRRC53A6NM62 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC53A6NM62 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC53A6NM62 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC53A6NM62 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC53A6NM62 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC53A6NM62 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.24■■□□□ 1.47
LRRC53A6NM62 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC53A6NM62 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
LRRC53A6NM62 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC53A6NM62 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
LRRC53A6NM62 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.23■■□□□ 1.47
LRRC53A6NM62 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
LRRC53A6NM62 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC53A6NM62 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC53A6NM62 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC53A6NM62 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 KRT8P33-201ENST00000508125 1423 ntBASIC24.22■■□□□ 1.47
LRRC53A6NM62 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.22■■□□□ 1.47
LRRC53A6NM62 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.22■■□□□ 1.47
LRRC53A6NM62 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC53A6NM62 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC53A6NM62 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC53A6NM62 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC53A6NM62 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.21■■□□□ 1.47
LRRC53A6NM62 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.21■■□□□ 1.47
LRRC53A6NM62 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.21■■□□□ 1.47
LRRC53A6NM62 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC53A6NM62 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.21■■□□□ 1.47
LRRC53A6NM62 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
LRRC53A6NM62 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LRRC53A6NM62 AC103724.3-201ENST00000564481 992 ntBASIC24.2■■□□□ 1.46
LRRC53A6NM62 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.2■■□□□ 1.46
LRRC53A6NM62 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LRRC53A6NM62 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
LRRC53A6NM62 AL353803.4-201ENST00000565882 1934 ntBASIC24.2■■□□□ 1.46
LRRC53A6NM62 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRRC53A6NM62 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRRC53A6NM62 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 SNX5-217ENST00000606557 1087 ntBASIC24.19■■□□□ 1.46
LRRC53A6NM62 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRRC53A6NM62 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LRRC53A6NM62 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
LRRC53A6NM62 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC53A6NM62 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
LRRC53A6NM62 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC53A6NM62 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC53A6NM62 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC53A6NM62 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.18■■□□□ 1.46
LRRC53A6NM62 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.18■■□□□ 1.46
LRRC53A6NM62 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.18■■□□□ 1.46
LRRC53A6NM62 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRC53A6NM62 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms