Protein–RNA interactions for Protein: A0A0A6YYG9

ARPC4-TTLL3, Protein ARPC4-TTLL3, humanhuman

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-TTLL3A0A0A6YYG9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.08■□□□□ 0.81
ARPC4-TTLL3A0A0A6YYG9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 AL117328.2-201ENST00000624617 1940 ntBASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MIR6724-1-201ENST00000616420 92 ntBASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MIR6724-2-201ENST00000616483 92 ntBASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MIR6724-4-201ENST00000617390 92 ntBASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MIR6724-3-201ENST00000622482 92 ntBASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ARPC4-TTLL3A0A0A6YYG9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ARPC4-TTLL3A0A0A6YYG9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms