Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 AC006455.2-201ENST00000429931 906 ntBASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 SUDS3P1-201ENST00000505831 966 ntBASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 LINC00543-201ENST00000567234 1845 ntBASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 MIR4767-201ENST00000582827 78 ntBASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 AC011298.3-201ENST00000615796 283 ntBASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB5Q9Y5E4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB5Q9Y5E4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB5Q9Y5E4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB5Q9Y5E4 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.86■■□□□ 1.41
PCDHB5Q9Y5E4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PCDHB5Q9Y5E4 AL139125.2-201ENST00000623134 1869 ntBASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCDHB5Q9Y5E4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB5Q9Y5E4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 MIR3181-201ENST00000578512 73 ntBASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB5Q9Y5E4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.83■■□□□ 1.4
PCDHB5Q9Y5E4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB5Q9Y5E4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 MIR935-201ENST00000401179 91 ntBASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB5Q9Y5E4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 AF213884.3-201ENST00000563833 479 ntBASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 AL136967.2-201ENST00000623968 743 ntBASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB5Q9Y5E4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 AP001330.3-201ENST00000520123 633 ntBASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 AC136469.2-201ENST00000623944 1028 ntBASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB5Q9Y5E4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 MIR939-201ENST00000401314 82 ntBASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PCDHB5Q9Y5E4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB5Q9Y5E4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms