Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 SNX5-217ENST00000606557 1087 ntBASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF4Q9BSR8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.16■□□□□ 0.98
YIPF4Q9BSR8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 BX664725.1-201ENST00000438252 379 ntBASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.15■□□□□ 0.98
YIPF4Q9BSR8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF4Q9BSR8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF4Q9BSR8 AC068473.5-201ENST00000616428 2072 ntBASIC21.14■□□□□ 0.98
YIPF4Q9BSR8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.14■□□□□ 0.97
YIPF4Q9BSR8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 GUSBP5-201ENST00000418136 578 ntBASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.13■□□□□ 0.97
YIPF4Q9BSR8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 AC021242.3-201ENST00000607598 1377 ntBASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF4Q9BSR8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF4Q9BSR8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms