Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC110285.6-201ENST00000617652 491 ntBASIC23.81■■□□□ 1.4
SMOQ99835 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMOQ99835 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMOQ99835 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.8■■□□□ 1.4
SMOQ99835 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.8■■□□□ 1.4
SMOQ99835 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.8■■□□□ 1.4
SMOQ99835 AC099791.2-201ENST00000605725 427 ntBASIC23.8■■□□□ 1.4
SMOQ99835 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SMOQ99835 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMOQ99835 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMOQ99835 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMOQ99835 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.79■■□□□ 1.4
SMOQ99835 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMOQ99835 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMOQ99835 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMOQ99835 AC093323.1-202ENST00000635031 2045 ntBASIC23.78■■□□□ 1.4
SMOQ99835 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMOQ99835 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMOQ99835 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.78■■□□□ 1.4
SMOQ99835 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
SMOQ99835 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.77■■□□□ 1.4
SMOQ99835 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.77■■□□□ 1.4
SMOQ99835 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SMOQ99835 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMOQ99835 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
SMOQ99835 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.77■■□□□ 1.4
SMOQ99835 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMOQ99835 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMOQ99835 AL139246.5-201ENST00000606645 996 ntBASIC23.76■■□□□ 1.39
SMOQ99835 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMOQ99835 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SMOQ99835 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
SMOQ99835 UNC93B3-201ENST00000308076 687 ntBASIC23.75■■□□□ 1.39
SMOQ99835 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 AC006455.2-201ENST00000429931 906 ntBASIC23.75■■□□□ 1.39
SMOQ99835 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.75■■□□□ 1.39
SMOQ99835 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SMOQ99835 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.75■■□□□ 1.39
SMOQ99835 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.75■■□□□ 1.39
SMOQ99835 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMOQ99835 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.74■■□□□ 1.39
SMOQ99835 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SMOQ99835 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMOQ99835 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SMOQ99835 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
SMOQ99835 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.73■■□□□ 1.39
SMOQ99835 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMOQ99835 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SMOQ99835 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SMOQ99835 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 AC241377.3-202ENST00000626088 1088 ntBASIC23.72■■□□□ 1.39
SMOQ99835 AC241585.3-202ENST00000628937 1088 ntBASIC23.72■■□□□ 1.39
SMOQ99835 AC245100.8-202ENST00000629247 1058 ntBASIC23.72■■□□□ 1.39
SMOQ99835 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMOQ99835 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMOQ99835 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.71■■□□□ 1.39
SMOQ99835 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.71■■□□□ 1.39
SMOQ99835 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms