Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 AL121749.1-202ENST00000609313 2153 ntBASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.44■□□□□ 0.7
CSMD1Q96PZ7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 AP004609.3-201ENST00000610705 1884 ntBASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 MIR3181-201ENST00000578512 73 ntBASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD1Q96PZ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 AC241377.3-202ENST00000626088 1088 ntBASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 AC241585.3-202ENST00000628937 1088 ntBASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.42■□□□□ 0.7
CSMD1Q96PZ7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CSMD1Q96PZ7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 AC006970.2-201ENST00000450065 779 ntBASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD1Q96PZ7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CSMD1Q96PZ7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSMD1Q96PZ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CSMD1Q96PZ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSMD1Q96PZ7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 MIR663A-201ENST00000385250 93 ntBASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD1Q96PZ7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD1Q96PZ7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD1Q96PZ7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.38■□□□□ 0.69
CSMD1Q96PZ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CSMD1Q96PZ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD1Q96PZ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 IGHV3-19-201ENST00000521488 291 ntBASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 AP005435.1-201ENST00000529293 1178 ntBASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSMD1Q96PZ7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 AC126544.1-201ENST00000580842 1059 ntBASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.36■□□□□ 0.69
CSMD1Q96PZ7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 AC096887.2-201ENST00000623443 1957 ntBASIC19.35■□□□□ 0.69
CSMD1Q96PZ7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms