Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
RFX6Q8HWS3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 SNX5-217ENST00000606557 1087 ntBASIC23.44■■□□□ 1.34
RFX6Q8HWS3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RFX6Q8HWS3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RFX6Q8HWS3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.42■■□□□ 1.34
RFX6Q8HWS3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RFX6Q8HWS3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.41■■□□□ 1.34
RFX6Q8HWS3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
RFX6Q8HWS3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RFX6Q8HWS3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RFX6Q8HWS3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RFX6Q8HWS3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 BX664725.1-201ENST00000438252 379 ntBASIC23.38■■□□□ 1.33
RFX6Q8HWS3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RFX6Q8HWS3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX6Q8HWS3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX6Q8HWS3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RFX6Q8HWS3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RFX6Q8HWS3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RFX6Q8HWS3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms