Protein–RNA interactions for Protein: Q5T2D3

OTUD3, OTU domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3Q5T2D3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
OTUD3Q5T2D3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.27■■□□□ 1
OTUD3Q5T2D3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
OTUD3Q5T2D3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
OTUD3Q5T2D3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.27■■□□□ 1
OTUD3Q5T2D3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 AC092068.2-201ENST00000590491 1708 ntBASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OTUD3Q5T2D3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 AC087393.1-201ENST00000582896 145 ntBASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
OTUD3Q5T2D3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 TSPY13P-201ENST00000338964 914 ntBASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTUD3Q5T2D3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTUD3Q5T2D3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 AC139795.1-202ENST00000500444 432 ntBASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
OTUD3Q5T2D3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTUD3Q5T2D3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.2■□□□□ 0.98
OTUD3Q5T2D3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms